Aneurinibacillus sp. Ricciae_BoGa-3: PP175_15560
Help
Entry
PP175_15560 CDS
T10201
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
aneu Aneurinibacillus sp. Ricciae_BoGa-3
Pathway
aneu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aneu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PP175_15560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aneu03019
]
PP175_15560
Messenger RNA biogenesis [BR:
aneu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PP175_15560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B_6
Raco_middle
Motif
Other DBs
NCBI-ProteinID:
WCK52838
LinkDB
All DBs
Position
complement(3075891..3077555)
Genome browser
AA seq
554 aa
AA seq
DB search
MSKLNQKALSIFALGGVGEIGKNMYVIQYADDIVVVDAGLKFPEEEMLGIDIVIPDITYL
EENREKVRGILITHGHEDHIGGLSYVLRRLNVPVYATKLTLGLIEGKLKEAGILGDSKLN
LIDNKSEVQLGCFTASFFKTNHSIPDTVGVSIETPEGTVVHTGDFKFDQTPVNNQVADFA
KMAKIGENGVLALLSDSTNAERPGYTGSERQVGEAIEERFHKAKGRIIVATFASNIHRIQ
QVIDAAALYNRKVTVVGRSMVNVVNVSMELGYLNVPEGMLIEPEEINKLPAERVVILSTG
SQGEPMSALTRMARSAHRKVDILPGDTVLIAATAIPGNEKYVARTVDQLYRIGAEVFYGS
NIHVSGHGSAEELKLMLNLMKPKYFIPIHGEFRMLRQHAILAEQCGVQPENIFLLDNGDT
VEIMSGKARYGPKVHAGIVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKQNGSIL
SGPDIISRGFVYVRESEALLEEANRIVTQTLNKCVEENVNEWSSLKTNVRDALGRFLYEQ
TRRRPMILPIIMEV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
ttgtctaaactcaaccagaaagctttgtcaattttcgctctgggcggcgtgggcgaaatt
ggcaaaaacatgtacgtaattcaatatgcggatgacatcgtggtagtcgatgcagggtta
aagtttccggaagaggaaatgctcggtattgatattgttattccggatattacgtactta
gaagagaacagagagaaagtccgtggtattcttattacacacggacatgaagatcacatc
ggtggtctctcttacgtactgcgcaggctgaatgtccctgtctacgccactaaactcacg
ctaggccttattgaagggaagctgaaagaagccggtatactaggcgattcgaagctcaac
cttatcgataacaagtcggaagtacaattaggctgctttacagcgagcttctttaaaacc
aaccatagcattccggatacggtaggtgtatccatcgagactccagaagggactgtggta
cacaccggagactttaaatttgaccagacgccggtaaataaccaggtagctgattttgcc
aaaatggctaaaatcggggaaaatggggtactcgcccttctttcagatagcacaaatgca
gagcgcccgggttataccggatctgaacgccaggtcggcgaagcgattgaagaacggttc
cacaaggctaaaggccgcattatcgttgcgacattcgcctccaacatccatcgcattcag
caggttatagacgctgccgcactctataaccgcaaagtaaccgttgttggacggtcaatg
gtaaatgtggttaacgtgagcatggaactgggctatctaaacgttccggagggcatgtta
attgaaccggaagaaatcaataaacttccagccgaacgcgtggttattctttcaacggga
agccagggagaaccgatgtctgctcttacgcgaatggctcgttccgcgcaccgtaaagta
gacatattgcctggggacaccgtgcttatcgctgcgaccgctattccaggaaatgaaaag
tatgtggcgcgcacggtagatcagctgtaccgaattggcgccgaagttttttatggcagc
aacatccacgtatcaggacacggaagtgcagaagaattaaaattgatgctgaacttaatg
aaaccgaagtatttcattcctatccacggggaatttagaatgcttcgccagcatgctata
ctcgctgaacaatgcggggttcaacccgaaaatatcttcttacttgacaacggagatacg
gttgaaatcatgagtggtaaagcccgttacggcccgaaagtccacgccggtattgtcctc
atcgacggactcggtgttggcgatgtcggaaacattgtgctgcgtgaccgcaagctgctt
tcccaggatggcattctcgtagttgtagttacattgagcaaacaaaatggctccattctt
tccggaccggatatcatatcccgcggatttgtgtatgtacgtgaatccgaggcgcttctg
gaagaagccaaccgcatcgttacccagacacttaataaatgcgttgaggaaaatgtgaat
gaatggtcttctctcaaaaccaatgtacgcgacgcactcggccggttcctgtatgaacag
acacgccgccgcccaatgattcttcccattatcatggaagtctaa
DBGET
integrated database retrieval system
