Aneurinibacillus sp. Ricciae_BoGa-3: PP175_15925
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Entry
PP175_15925 CDS
T10201
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aneu Aneurinibacillus sp. Ricciae_BoGa-3
Brite
KEGG Orthology (KO) [BR:
aneu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aneu03032
]
PP175_15925 (topA)
03400 DNA repair and recombination proteins [BR:
aneu03400
]
PP175_15925 (topA)
Enzymes [BR:
aneu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PP175_15925 (topA)
DNA replication proteins [BR:
aneu03032
]
Prokaryotic type
DNA Topoisomerases
PP175_15925 (topA)
DNA repair and recombination proteins [BR:
aneu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PP175_15925 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Zn_ribbon_recom
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
WCK52910
LinkDB
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Position
complement(3146804..3148882)
Genome browser
AA seq
692 aa
AA seq
DB search
MADSLVIVESPAKAKTIGKYLGKKYIVKASMGHVRDLPKSQMGVDIEKDFEPKYITIRGK
GDILKELRDASRKVKNVYLAADPDREGEAIAWHLAHSLNIDETKACRVVFNEITKQAVKE
AFKNPRKINMDVVNAQQTRRILDRLVGYNISPLLWKKVKKGLSAGRVQSVAVKLINDREK
EINAFIPEEYWSVTASLLSGKEPFEAKFYGINGEKTEIRSEEEVKKLLSEIKGKDFIVSE
IKKRERKRNPAAPFTTSSLQQEAARKLNFRASKTMMIAQQLYEGIDLGKEGTVGLITYMR
TDSTRISQIAQEEAKKYITEAYGQPYALSEPRQFSKKEKAQDAHEAVRPTLVATTPAELK
SFLSRDQFKLYQLIWERFIASQMASAVLDTVSAEILCGNAVFRASGSQIKFPGFMKVYVE
GTDDAEKEDDRMLPPLEEQQKLMLSNVEPKQHFTQPPPRYSEARLVKTLEELGIGRPSTY
APTLETIQKRGYVSMQDRRFVPTELGEIVITLMEEFFPEILDTEFTAKMEADLDHIEEGK
EQWSGVLRDFYSDFAKRLEVAEQHMQEIEIEEEVSDIVCEKCGKYMVYKMGRYGKFLACS
GFPDCRNTMAITKEIGVDCPKCGGAVVERKSKKNRIFYGCSHYPDCDFVSWDKPLPRKCP
KCSELLVEKKKKGKGGGTTVHCAACDYEEQSS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
ttggcagattcactggtaatagtggagtctcccgctaaggcgaagacaatcggaaaatat
ctgggcaagaaatatatcgtaaaagcatcaatggggcatgtccgtgacctgcctaaaagc
cagatgggcgttgatatagaaaaggattttgaacctaaatatataacaattcggggcaag
ggcgacatcttaaaagaactgcgcgatgcctcacgtaaggttaagaatgtgtatcttgca
gctgaccctgatcgcgaaggggaagccattgcatggcatctcgctcacagcttaaatata
gacgaaacgaaagcgtgccgggtcgtgtttaacgagattaccaagcaggctgtaaaagaa
gcgtttaaaaatccccgcaaaattaacatggatgtggtaaacgcccagcaaacccgccgg
atactggaccggcttgttggatataacatttcacctctgttgtggaaaaaggtgaaaaaa
ggtttgagcgccggccgcgtccagtcggttgcggttaaattaataaatgacagggaaaaa
gaaataaatgcctttataccggaagagtactggtcagttactgccagccttctctccgga
aaagagccgtttgaagcgaagttctacggaatcaacggcgagaaaacagaaatccggtcc
gaagaggaagtaaagaagctgctctccgagattaaagggaaagactttattgtatcagag
ataaaaaaacgcgaacgaaagcgcaatccggccgcaccttttacaacaagctctctgcag
caggaagctgcccgtaagttgaacttccgcgcttccaaaacgatgatgatagcccagcag
ctttatgagggtatcgatctaggcaaagagggcacagttggtttaattacgtatatgcgg
acggattccacacgtatctcgcaaatagcccaggaagaagcgaagaaatatatcacggag
gcgtacgggcagccctatgctttgtctgagccccgccagttcagcaagaaagaaaaagcg
caggatgcccatgaggcggtgaggcctacgcttgtcgccacgactcccgctgaactgaaa
tcgttcttgtcccgtgaccagtttaagctgtaccagcttatctgggagcgtttcattgcg
agccagatggcgtcagccgtactggataccgtatcggcggagattttatgcggcaacgct
gtcttccgtgcaagcggttcacaaattaaatttcctggatttatgaaggtgtatgtcgaa
ggaacagatgatgctgagaaggaagatgacagaatgcttcctccgcttgaggagcagcag
aaattaatgcttagcaatgttgaaccgaaacagcactttacccagccgccgccgcgttat
tcagaggctaggcttgttaaaacgcttgaggaattggggattgggcgaccgagtacgtac
gctccgacgcttgaaaccattcaaaaacgcggctatgtttccatgcaggaccgccgcttt
gttcccactgagcttggagaaatcgtcattactctgatggaagaatttttcccggaaata
ctagatacggaatttacggcgaaaatggaagcggaccttgaccatattgaggaaggaaaa
gaacagtggtcaggcgtgctgcgtgatttttacagcgattttgccaaacgcctggaagtt
gccgagcagcatatgcaggaaattgaaattgaagaagaagtatccgacatcgtctgtgaa
aaatgcgggaagtatatggtttataaaatgggccgctatggaaaattcctggcttgctca
ggttttcctgactgccggaatacgatggccatcacgaaagagataggcgtagactgtccg
aagtgcggcggcgctgtagtggagcgcaagagtaaaaagaacaggattttttacggctgc
agccattatcctgattgcgattttgtatcctgggataaaccgcttccgcgaaaatgtcca
aaatgcagcgaactgcttgttgagaagaagaaaaagggcaaaggcggcggtaccacagta
cattgcgctgcatgcgactatgaagagcaatcctcatag
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