Aquipluma nitroreducens: AQPE_0211
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Entry
AQPE_0211 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_0211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_0211
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_0211
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_30
GerE
HTH_23
HTH_24
TRAPP
PhyR_sigma-like
Dbl7
SMMA_C
Motif
Other DBs
NCBI-ProteinID:
BBE16074
UniProt:
A0A5K7S401
LinkDB
All DBs
Position
complement(253457..254053)
Genome browser
AA seq
198 aa
AA seq
DB search
MEKKGKYKFIRFKEELSQESFTDFFDYYFIRLNQFATTIVKSDLLAEEIVLDVFLKLWEN
SKTLDAINNIETYLYISVRNKSINVLKKERKFHFDILENSYIQLADYNPSAESDLIEHEM
FGALNEAVLQLPSKCKIIFKLIREDGLNRNEVAQVLNISAKTVDNQVAIAIKKIAEQLNI
DLTNPKNSHGLMTFLLFF
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
ttggagaaaaaaggaaaatataaatttatccggtttaaagaagaattatctcaagaatcg
tttactgatttttttgattattactttatcaggttaaaccaatttgcaacgaccattgta
aaatcagatttattagccgaagaaattgtccttgatgtttttctgaaactttgggagaac
agtaaaactttggacgcaataaataatattgaaacatatttgtacatatctgtaagaaat
aagtcgataaatgttctaaaaaaagaacggaaatttcactttgatattctggagaactcc
tatatccagctagctgattataacccatcagcagaaagtgatcttatcgaacatgaaatg
tttggcgcattaaatgaagcagtgctgcaactaccctctaaatgcaaaatcatttttaaa
ttaattcgcgaagatggacttaatcgtaatgaagttgctcaggttctcaatatttctgca
aaaacagtcgataaccaagttgctatagcgataaagaaaattgcggagcaactaaatatt
gatcttactaatcctaaaaattctcatggattaatgacttttctactcttcttttag
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