Aquipluma nitroreducens: AQPE_0214
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Entry
AQPE_0214 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_0214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_0214
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_0214
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_24
HTH_23
HTH_11
ATP-grasp_4
HTH_5
HTH_40
PF0610-like_N
DUF722
MarR
DUF7646
HTH_3
HTH_10
Sigma70_r3
HTH_Tnp_ISL3
HTH_28
HTH_AsnC-type
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BBE16077
UniProt:
A0A5K7S3K0
LinkDB
All DBs
Position
255774..256430
Genome browser
AA seq
218 aa
AA seq
DB search
MQNRIIFHSFDRFIFNISYRMKQGVSNEEFFILQRMIEGDENAFKYFFDAYYDNLCNFVN
SYLRDETLSEDVVQSIFIYLWEKKDSLSSNCSIKSYLYTASKNKSLNQLRNIKNKNKIIG
ELLTQPELISDERADRFLEFEELKTIISNAIDGLPTQCKTIYQLSRDEGLTNKEIAEKLG
ITVKTVENQMTIAIRKIKFFLQPYHDQIFIFFIVANFF
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
ttgcagaataggattatatttcattcttttgatcggtttatcttcaacattagttacaga
atgaaacagggtgtgtcaaacgaggaattcttcattttacaaaggatgatagaaggtgat
gaaaatgccttcaaatatttctttgacgcatattatgataatctttgcaacttcgtcaac
agttatttgcgcgatgaaacactttcggaagacgtggttcaaagcatttttatttattta
tgggagaaaaaagattccctttcgtccaattgttctataaagtcatacctatacacagct
tcaaaaaataaaagtctaaatcaactccgaaacattaaaaacaaaaacaaaattataggt
gaacttttaactcaacctgaattgatttctgatgaaagggctgaccgattcctggaattt
gaagaattaaaaacgattatttccaatgcgattgatggactgccaacgcaatgcaaaact
atctatcagttaagcagggatgaagggttgacaaacaaagagattgcagaaaaactgggc
attacggttaaaacagtcgagaaccagatgaccattgccatccgaaaaataaaatttttt
ttacagccatatcacgaccaaatattcatttttttcattgttgcaaatttcttttga
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