Aquipluma nitroreducens: AQPE_0467
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Entry
AQPE_0467 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_0467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_0467
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_0467
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_24
Crp
HTH_11
HTH_16
Motif
Other DBs
NCBI-ProteinID:
BBE16330
UniProt:
A0A5K7S4C7
LinkDB
All DBs
Position
complement(533288..533863)
Genome browser
AA seq
191 aa
AA seq
DB search
MDSQISEIQLIKAFKKGDAQAFESLFNLYHKRLYYFLFGLLKSKEDAEEIVQETFLKIWE
SREFFWENYPFESLLFRIAKNAFLNYNRKKVNRAVFEKHFGLFTELSESSADQYILFQET
QSIIETIVNGLPPKRKEIFLLQKVEGLSRQEIADKLGISIITVDSQLLKANKFLKEEFQK
FSILMINILFL
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
ttggactcgcaaatttctgaaatacaactcattaaagcatttaagaagggagatgcccag
gcttttgagtcgctttttaatttgtatcacaagcgactgtattacttcttgttcgggttg
ttaaagtcgaaagaagatgctgaagaaattgttcaggaaacatttttgaaaatttgggaa
agccgtgaatttttttgggagaattaccctttcgaatctttgcttttcagaattgcgaaa
aacgcttttctaaattataaccggaaaaaagtgaaccgcgcggtctttgaaaaacatttc
ggattatttactgaactttcagagagttcagcggatcaatatatcctctttcaggaaaca
caaagcattattgaaacaatagtgaatggattacctcccaaaagaaaagagatttttctt
ttgcaaaaagtagagggactttcccggcaagaaattgctgacaaattagggatttcgatt
attacggttgacagtcaattgcttaaggcaaacaaattcttaaaggaagaatttcaaaag
tttagcattctgatgatcaacattctctttttataa
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integrated database retrieval system
