Aquipluma nitroreducens: AQPE_0506
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Entry
AQPE_0506 CDS
T09507
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
anf
Aquipluma nitroreducens
Pathway
anf03030
DNA replication
anf03430
Mismatch repair
anf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AQPE_0506
03430 Mismatch repair
AQPE_0506
03440 Homologous recombination
AQPE_0506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anf03032
]
AQPE_0506
03400 DNA repair and recombination proteins [BR:
anf03400
]
AQPE_0506
Enzymes [BR:
anf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AQPE_0506
DNA replication proteins [BR:
anf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AQPE_0506
DNA repair and recombination proteins [BR:
anf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AQPE_0506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
BBE16368
UniProt:
A0A5K7S475
LinkDB
All DBs
Position
582312..585248
Genome browser
AA seq
978 aa
AA seq
DB search
MYLNCHSYYSLHYGTLSIAELLDLAIQNNVGTIALTDINTTMGIPEFVKEAELKGIRPIA
GCEFRNEDDLLYIGLAKNREGLKELNDWQTEHNLQQKSYPTDAPEFKHVYVIYPFGRKLP
NELRENEFTGIKASQLNKLLTSEYLKHPENLAVWQPVTFKNKEGQFLHKTLRAIDYNVLI
SKLQENQFASQPETIDYNDLVNQFRDYPEIVQNTEKMMEACSISFDFKSVKNKKLFGQSA
YDDRLLLQKLALDGMVYRYGKSNQEAKQRIAHELEIIDKLGFSSYFLIAWDIIRYSMSCG
FYHVGRGSGANSIVAYCLKITDVDPIKLNLYFERFLNPKRTSPPDFDIDYSWRDREQVQD
YIFKRYGRDHTALLGATSTFKDRSIFRELGKVFGLPKEEIDMLVDNPNDERNSNKITRLI
KILSEQMVDFPNLRSIHAGGILISEEPLTYYTALDLPPKGFPTTQWDMYMAEDLGFEKLD
ILSQRGIGHIKEAVDIIYENQGEVVDVHQVERFFQDEQVKLQLRTAETNGCFYIESPAMR
GLLTKLHCDNYLSLVAASSIIRPGVAKSGMMKQYIQRFHRPETIQYLHPAMKEQLEETYG
VMVYQEDVIKVAHHFAGLDLAEADVLRRAMSGKFRSKVEFQRIVDKYFSNCRERGYSDEI
AREVWRQIESFAGYSFSKAHSASYAVESFQSLFLKAHYPLEFMVAVINNFGGFYRTWVYF
NEAQRCGAKIELPCVNRSRPETRISGKVIFIGFVHVQNLEQSVISGIVNERQQHGSFSSL
SDFIERTAITKEQLVILIRLGALRFTGISKAELLWKAHMLLNKTVPVAKTKALFEAKPRE
FNLPKLEQSVLGDAWDEIELIGFPVSLTAFDLLQTNFRGEITAKEMMNHLGKTVRMLGRL
VTIKYVRTIRNEIMHFGTFTDVQGEFFDTVHFPPSLKNYPFRGDGIYLVLGKVVEEFGFP
SLEVEKMAKMPFQANPKA
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgtacctcaattgtcactcatactactcccttcactacggaacgctcagcattgcggaa
ttgctcgatttggctattcaaaacaatgtcggaacgattgccctaaccgacatcaatacc
accatgggtattccggaattcgtgaaagaagcggagttgaaaggcatcagacccattgcc
ggatgcgagttccgcaatgaggatgacttgctttatattggtctggccaaaaaccgcgaa
ggcctgaaagagttgaacgactggcaaacggaacacaaccttcagcaaaaatcatatcct
acagatgctcctgaatttaagcacgtgtatgtgatttatcccttcggaagaaagttgccc
aacgaactgcgcgaaaacgaatttaccggaataaaagccagccaactgaataaactacta
acctccgaatacctcaaacatccggagaatctggctgtttggcagccggttacttttaaa
aataaggaaggtcagtttctgcacaaaacccttcgggcgatcgattacaatgtactgatc
agcaaacttcaggaaaaccagtttgccagccaacctgaaaccatcgattataacgattta
gtgaaccagtttcgggactatccagagattgtacaaaacaccgaaaaaatgatggaggct
tgcagcataagcttcgattttaaatcggtcaagaataaaaaattgtttggacaatcggct
tatgacgacagacttttgctccaaaaactggcgctcgacggcatggtttatcgctacgga
aagagcaatcaagaagcaaaacagcgaattgctcacgaactggaaatcatcgacaaactt
gggttttcgtcgtatttcctgattgcctgggacatcatccgctacagcatgtcgtgcgga
ttttaccacgtcgggcgaggaagcggagccaacagcattgtggcctattgcctgaaaatt
actgatgttgacccgattaagctgaacctttattttgagcggttcctgaaccccaaacgc
acttccccgcccgatttcgacatcgattattcgtggcgcgaccgcgagcaggttcaggat
tacatttttaaacgttacggacgcgaccacacggctttgttgggcgcaacatccacgttt
aaagaccgttccattttccgcgaactgggcaaagtttttggcctcccgaaagaagagatt
gacatgctggttgacaacccgaacgacgaacggaattcgaacaagatcacgcggctcatc
aaaatcctttccgaacagatggttgatttccccaatctccgaagtattcatgccggtggc
atcctgatttcggaagaacccctcacctactacaccgcgctcgatttgccgcccaaaggc
tttccgaccacgcaatgggacatgtatatggccgaagatctggggttcgaaaagctggat
attttgagtcagcggggcattgggcacatcaaagaggcggtggatatcatctacgaaaat
cagggcgaagtggtcgatgtgcatcaagtggagcgtttttttcaggacgaacaggttaaa
cttcagttgagaacagcagaaaccaatggctgtttttacattgaaagccctgccatgcgc
ggtttgctgaccaaattacattgtgataattacctgtcgctggtagctgccagttccatt
atccggcccggggtagccaaatcaggaatgatgaagcagtacattcagcggtttcatcgt
ccggaaaccatccaatatctgcatccggcgatgaaggaacagctcgaagaaacctacggc
gtgatggtttaccaggaagatgtaattaaggtggcacatcattttgccggactcgatctg
gccgaagccgatgtactgcgccgcgccatgagcgggaagtttcgctcgaaagttgagttt
cagcgcatcgtcgacaagtatttcagcaattgccgcgagcgtggttattccgacgaaatt
gcccgcgaagtgtggcggcaaatcgagtcgtttgctgggtattcgttttcgaaagcgcat
tcagcttcgtatgccgtcgaaagtttccagagtttattcctgaaagcgcattatccgctc
gaatttatggtggctgtaatcaacaatttcggtggattttaccgcacctgggtgtatttt
aacgaagcgcaacgctgcggagctaaaatcgaattgccctgtgtgaaccgaagtcgcccc
gaaacccggatttcaggaaaggtaattttcattggttttgtgcatgtgcaaaacctcgaa
cagtcggtcatttcaggaattgtgaacgaacggcagcaacatggaagcttcagttcgcta
tcagattttattgagcgaacggccattaccaaagagcaattggtgatcctaattcggctg
ggcgcattgcgtttcaccggaatatcaaaagccgaactgttgtggaaagcacacatgctc
ctgaataaaacagttccggttgccaaaacaaaagctctattcgaagcaaagccacgcgaa
ttcaaccttccgaagttggagcaatcagtgttgggcgatgcctgggacgaaattgaactg
attgggtttccggtttcgctaactgctttcgacctgctccaaaccaatttcagaggcgaa
attacggccaaagaaatgatgaatcacctgggaaaaacggttcggatgctgggccgtttg
gtcactattaaatacgttcgcacgatcaggaatgagattatgcacttcggaacgttcacc
gatgttcagggtgaattctttgatactgtacatttcccgccatcgctaaaaaattatccg
ttcaggggcgatggaatttacctggttttaggcaaagtggttgaagaatttgggtttccg
agcctcgaagtggaaaagatggcaaagatgccgtttcaggcaaacccaaaggcatga
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