Aquipluma nitroreducens: AQPE_0619
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Entry
AQPE_0619 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_0619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_0619
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_0619
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_23
Sigma70_r2
HTH_24
HTH_40
DUF6456
HTH_11
DUF6483
HTH_10
HTH_28
Motif
Other DBs
NCBI-ProteinID:
BBE16480
UniProt:
A0A5K7S4S1
LinkDB
All DBs
Position
complement(715475..716068)
Genome browser
AA seq
197 aa
AA seq
DB search
MTQEREHILFTEIRNGNEEAFNKAFDLYYSRLCFFSDQILHDFDLSRSIVQQIFVDLWIK
RDRLLVASLQAYLYHSTRNASLDVLKHKKVESRYLSSLEPNESIVEADLMEEAELAARIN
EAIQNLPEKCREIFLLCRFEGLKYAEIADRLNISVKTVEMQISIALKKLRKDLSDYQMIQ
LLSFFISKKHQLPYRVI
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgactcaggaaagggaacatattctttttacagaaatcagaaatggtaatgaggaggct
tttaataaagcctttgatttgtattattcccgcctttgttttttttccgatcagattctt
cacgattttgatttatccagatcaatcgtacagcagatatttgtcgatctttggatcaag
cgcgacagactgcttgtagcttctcttcaggcttacctttatcattcaacccgcaatgct
tcgctggatgtgctgaaacacaaaaaagttgaatcgcgctatctgtcatcacttgaaccg
aatgaatcaatagttgaagctgatttgatggaggaagcggaacttgcagcgcggatcaat
gaggccatacaaaaccttccggagaaatgtcgcgagatttttttattgtgccgttttgaa
ggcttgaaatatgctgaaattgccgatcggttaaatatttcggttaaaactgtggaaatg
cagattagtatcgccttaaaaaaacttcgaaaggatttgtctgattatcagatgatacaa
ctcttgtctttttttatttcaaaaaaacatcaacttccttacagggtaatttag
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integrated database retrieval system
