Aquipluma nitroreducens: AQPE_1002
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Entry
AQPE_1002 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_1002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_1002
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_1002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_40
HTH_10
HTH_23
HTH_11
HTH_36
PhyR_sigma-like
HTH_28
DUF1492
HTH_5
AstA
DUF8394
HTH_24
HTH_20
Xre-like-HTH
HTH_17
FeS_assembly_P
HTH_38
PCI
Motif
Other DBs
NCBI-ProteinID:
BBE16855
UniProt:
A0A5K7S5U3
LinkDB
All DBs
Position
1127638..1128267
Genome browser
AA seq
209 aa
AA seq
DB search
MDNNQHIELLSKKISQNSDQQAFKELYLVYFDKLYKFAFSILHSAEFAEEAVNDVFLNIW
QKRSSLKNIESLKNYLFISTKNTSFNYLSKFRKERNTSLDDVLVRFEIDELTPETAFFTN
EIRNEIEQAINQLPPKTKLVFQMAKVEGLKYKEIAEILNISVNTIDNHIATAIKKLSIVL
KDLSTEETNLILFQLFTRFNLNNLTINQV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
ttggataataaccagcatattgaattgctatcgaaaaaaataagccagaattccgatcaa
caggcatttaaagaattatatctggtctatttcgacaagttatacaagttcgccttttcg
atacttcattccgcagaatttgcagaagaagcagttaacgatgttttcctgaacatctgg
caaaaaagatcaagcctgaaaaacattgaaagcctgaaaaattacctctttatttcaact
aaaaacacctctttcaattacctgagtaagtttaggaaagaacgaaacacttcgctggat
gatgtactggttcgatttgaaattgacgaattaactccggaaacagcgtttttcacgaac
gaaatccgcaatgaaatagaacaagccattaatcagcttcctcctaaaacgaaactggtt
tttcaaatggcaaaagtcgaaggtctcaaatacaaggaaattgcagaaatcttaaatata
tcagtaaacacaattgacaaccacattgccaccgcgataaaaaaattaagcattgttctt
aaagatctatccactgaagaaactaatcttattctttttcagctatttacccgatttaac
ttaaataatttaacaattaaccaagtttaa
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