Aquipluma nitroreducens: AQPE_1152
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Entry
AQPE_1152 CDS
T09507
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
anf
Aquipluma nitroreducens
Pathway
anf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AQPE_1152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_1152
03400 DNA repair and recombination proteins [BR:
anf03400
]
AQPE_1152
Enzymes [BR:
anf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AQPE_1152
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AQPE_1152
DNA repair and recombination proteins [BR:
anf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AQPE_1152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
BBE17004
UniProt:
A0A5K7S6N3
LinkDB
All DBs
Position
complement(1292477..1293430)
Genome browser
AA seq
317 aa
AA seq
DB search
MVETDEKYGKFEFRPLEPGYGITIGNALRRILLSSLEGYAITTVKIDKVDHEFATIKGVM
EDVTEIILNLKQIRFKREVEDFDNEKVSISITGQDTFTAGDINKFMTGFRVLNPELIICR
MEPEVKLQMDITINKGRGYVPSAENKPIDAEFGVIPIDSIFTPIKNVKYAVENYRVEQKT
DYEKLVFEITTDGSIHPKDALKEAAKILIYHFMLFSDEKITIDSDEKFANEEFDEEVLHM
RQLLKTKLVDMDLSVRALNCLKAADVETLGELVTYNRNDLLKFRNFGKKSLTELDDLLVS
LNLTFGMDISKYKLDKE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggttgaaaccgatgagaagtacggtaaattcgaattccgtccattggaaccaggttat
ggtattacaattggtaatgccttacgaagaattctgttatcctctttggaaggttatgca
attacaactgtcaaaatcgacaaagttgaccatgaatttgcgactattaaaggtgtaatg
gaagatgtaactgaaattatccttaatctgaagcagattcgttttaaacgtgaagttgaa
gattttgataatgagaaggtttctatctcaattaccggacaggacacattcactgccgga
gatattaataaatttatgaccggcttccgtgttttaaatccagagttaattatctgccgg
atggaacctgaagttaaattgcagatggatatcaccatcaacaaaggtcgcggatatgtc
cctagcgctgaaaataagccgatcgatgctgagtttggagtaattccgatcgattcaatt
ttcacaccgatcaaaaatgtgaaatatgctgtcgaaaattatcgtgttgagcaaaaaact
gactatgaaaagttagtttttgaaatcacaaccgatggttcaattcatcctaaagatgca
ttgaaagaagctgcaaaaattctgatttatcatttcatgctgttctctgacgaaaaaatc
accattgattcggacgagaaatttgccaacgaagagtttgatgaagaagtattgcacatg
cgccaacttttgaaaacaaaactggttgacatggatctttctgtacgtgcattgaattgc
ctgaaggctgcggatgttgaaaccctaggagagctggttacttataaccggaacgatttg
cttaaattccgtaattttggtaaaaaatcactcacagaattggatgacttattggtgagc
ttgaatttgacgttcgggatggatatcagtaaatataaacttgataaggaataa
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