Aquipluma nitroreducens: AQPE_1554
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Entry
AQPE_1554 CDS
T09507
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
anf
Aquipluma nitroreducens
Pathway
anf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AQPE_1554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anf03019
]
AQPE_1554
Enzymes [BR:
anf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AQPE_1554
Messenger RNA biogenesis [BR:
anf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AQPE_1554
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Utp25_C
Cas3-like_C_2
Mov-10_helical
Motif
Other DBs
NCBI-ProteinID:
BBE17404
UniProt:
A0A5K7S7V2
LinkDB
All DBs
Position
complement(1752974..1754263)
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AA seq
429 aa
AA seq
DB search
MIEPILRALKTEGYETPTPIQEQAIPIILQRKDLLGCAQTGTGKTAAFAIPIIQILHETH
NPARGKRKIKALIVTPTRELAIQIGESFAAYGRHAGLKHTVIFGGVGERPQTDALRAGID
ILIATPGRLLDLMNQGYIDFRSIELFVLDEADRMLDMGFIHDVKRIIAELPRERQSLFFS
ATMPADIVKLSQTILNNPSKVEVTPESTTAEKVEQQMYMVNYADKRSLLLHLLRNPEIVS
ALVFTRTKHGADKVVQHLQKNGHNAMAIHGNKSQNARQKALSDFKSGKIRVLVATDIAAR
GIDVDDLSHVINYEIPNIPETYVHRIGRTGRAGQSGIALSLCDNTEILFLRDIQRLISQT
IPVVSDHPYAMTDFTPEKAPAKQARKPIARQHNGQAARENSGNREARPTNHPSAQTEQKP
KRTFWSRRP
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
ttgattgagcccatcctgagggctttaaaaacagaaggttacgaaacacctaccccaatt
caggaacaagcaatacccatcatacttcagcgaaaagatttattaggttgtgcacaaaca
ggtaccggaaaaacagcagcttttgccattccaattatccaaattctgcacgaaacacat
aatccggccaggggaaaacgtaaaataaaggccctgatagtaacaccaacccgcgaattg
gcgatccagattggcgaaagttttgcagcttatgggcgtcatgccgggctgaaacatacc
gttatttttggtggtgttggcgaacgtccgcaaaccgatgccttgcgcgctggtattgat
attctgattgctacgccaggtcgtttgctcgacttgatgaatcagggatacattgatttc
cggagtattgaattgtttgtgctcgacgaagccgaccgcatgctcgacatgggtttcatc
cacgatgtaaagcgcatcattgctgagcttccgcgagagcgccagtcgttgttcttttcg
gcgactatgccggctgacatcgtgaaactttcgcaaacgatcctgaacaacccttcgaaa
gtggaagttactcctgaatcgactaccgccgaaaaggttgaacagcaaatgtatatggtg
aattacgccgataagcgcagcttgttgcttcatttgctcagaaacccggaaattgtttct
gccttggtatttacccgtacgaaacatggcgccgacaaagtagtgcagcatctccagaag
aacggtcataatgcgatggccattcacggtaataaatcacaaaatgcccgtcagaaagct
ctttcagactttaaatccgggaaaatacgcgtattggtagctaccgatattgcagctcgc
ggaattgacgttgacgatttgtcgcacgtgattaattacgaaataccgaatattcctgaa
acctacgttcaccgtattggcagaaccgggcgtgccgggcaaagtggtattgcactttct
ttgtgcgacaataccgaaattttattcctgcgcgatattcagcgattgatttctcaaacc
attccggtggttagcgatcatccgtatgcaatgaccgattttactcctgagaaagcacca
gcaaaacaagcaagaaaaccgattgcacgtcagcacaacggacaggcagcgagggaaaat
tcgggcaatcgcgaggcaagaccgaccaatcacccatcggctcagaccgaacagaaacct
aaacggacattttggagcagaaggccataa
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