Aquipluma nitroreducens: AQPE_2101
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Entry
AQPE_2101 CDS
T09507
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
anf02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_2101
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AQPE_2101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_2101
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_2101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
GatB_Yqey
TrmO_C
LacI
Motif
Other DBs
NCBI-ProteinID:
BBE17942
UniProt:
A0A5K7S8R5
LinkDB
All DBs
Position
complement(2351259..2352617)
Genome browser
AA seq
452 aa
AA seq
DB search
MQLEQRIKSELEENPILELVEGEDFDESFDDTDTDDSQSDDEFSLDDYLNDEDIPNYRLA
ANNYSKDDKQVDMPYSSGVSFHDSLIEQLGLSNLKEEEELIAEYIIGNIDEDGYLRRDLL
SISDDLAFHMNIEVKLEDLERYLAIIQDFDPPGIGARDLQECLLLQIKRKKGKNSTSLAA
RIIKDCFEEFTKKHYDKILKKYEISEEELKESIDEILKLNPKPGSSYSNPMGKSNQVIVP
DFLLDNLEGELNLSLNQKNVPDLQLNSTYIDLMKSYSGNKIGATKDKKEALTFMKQKLDS
AKWFIDAIRQRHNTLYVTMSEIIKFQKEFFQDGDETKLKPMILKDIADLTGLDISTISRV
SNSKYIQTHFGIYPLKYFFSEGLQTDTGEEVSTREIKKILAECIDNEDKRHPVTDEKLAL
ILKEKSYLVARRTVAKYREQLGIPVARMRKEL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgaacaacggataaaaagtgaattggaagaaaacccgattcttgaactggtt
gaaggtgaagattttgatgaaagttttgatgatacagataccgatgattctcagtcagat
gacgaattttcattggacgattacctcaacgatgaagatattccgaattaccgtttagct
gccaacaattattcgaaagacgacaagcaggttgatatgccctattcatcaggagttagc
tttcacgattcgctcattgaacagcttggcttatcgaacctaaaagaagaagaggaactg
attgctgaatacattattggcaatattgatgaagatggatacctccggcgcgatttgctc
tccatttcagacgatctggcttttcacatgaacatcgaagttaaactggaggatctggaa
cgttaccttgcaattattcaggattttgatccgcctggtattggcgcacgcgatcttcag
gaatgtttgctccttcagatcaagcgaaaaaaaggaaagaattcgacgagtctggcagcg
cggatcattaaggattgttttgaagaatttaccaaaaaacactacgataaaatcctgaag
aaatacgaaatttcggaggaagagctgaaggaatccattgatgaaattctgaagttaaat
ccgaaaccgggaagttcatacagtaacccaatgggcaaatccaatcaggttattgttcct
gattttttgcttgataatctggaaggcgaacttaacctgagcctgaaccagaaaaatgtt
cccgaccttcagctaaacagcacttacatcgatctgatgaaatcctattcaggaaataag
atcggtgctacgaaagataaaaaagaggctttgacgttcatgaaacagaaattggactcg
gccaaatggtttatcgatgccattcgtcaacgccataatacgctgtatgttacgatgagc
gaaatcattaaatttcagaaagaattttttcaggatggcgacgaaaccaagctgaaacct
atgattctgaaagacattgccgatttaaccggacttgatatttcgaccatctcgcgtgtt
tcgaacagcaaatacattcaaactcatttcggaatttatccgttgaaatacttcttctct
gaaggcttgcaaaccgataccggcgaggaagtctcgacgcgtgaaataaaaaaaatactg
gctgaatgtattgataatgaagataaacggcatcctgttaccgacgaaaaacttgcttta
atcctgaaagaaaaatcgtacctggttgcccgccgaactgttgccaagtaccgtgaacaa
ctcgggattccggttgcccgtatgagaaaagaactttaa
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