Aquipluma nitroreducens: AQPE_2587
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Entry
AQPE_2587 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_2587
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_2587
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_2587
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
GerE
HTH_11
MerR_1
HTH_23
HTH_24
Motif
Other DBs
NCBI-ProteinID:
BBE18425
UniProt:
A0A5K7SA95
LinkDB
All DBs
Position
2881834..2882385
Genome browser
AA seq
183 aa
AA seq
DB search
MKLTDDLLIVGIKKDDYACYNQLFMRYYSRLCAFVFNLTQNYSASEDVVQELFIRLWIQR
GKLEIKESTSGYLYRASKNAALNYLRAEKSRQKSIQNMPVQEWQIDEDQIEQIEFSVALN
KCIEQLPDRSRDVFMKSRFDGLRQQEISDQLGISVKTIKNQIWKSLQFLKACLELHEAFE
HGA
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaccgatgatcttttaatagttggtattaaaaaggatgattatgcttgttat
aatcagctttttatgcgctattacagtcggctttgtgcatttgtttttaaccttacacaa
aattacagtgcttccgaagacgttgttcaggagctttttatcaggctgtggattcaacgc
ggaaagcttgaaattaaagaaagtacttccgggtatttatatcgtgcctcaaagaatgcc
gccctcaattacctgcgtgccgaaaaaagccgccagaaatcaattcaaaatatgccggtc
caggaatggcaaatagatgaagatcagatagaacagatcgaattcagtgtcgcactaaac
aagtgcatcgaacaattgcccgatcggagtcgcgatgtgttcatgaaaagccgattcgat
ggcctcaggcaacaggaaatatctgaccaattaggtatttcggtaaaaaccatcaaaaat
caaatctggaaatcgttgcaatttctgaaagcctgcctcgaactgcatgaagcgtttgag
catggggcatag
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integrated database retrieval system
