Aquipluma nitroreducens: AQPE_2799
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Entry
AQPE_2799 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_2799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_2799
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_2799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
HTH_10
Sigma70_ECF
HTH_40
HTH_24
DUF722
PF0610-like_N
HTH_11
Gemini_BL1
HTH_5
HTH_23
HTH_Crp_2
MCEL_TPase
DUF2774
HTH_ParB
EntA_Immun
HTH_38
HTH_Tnp_ISL3
HTH_AsnC-type
HTH_20
Motif
Other DBs
NCBI-ProteinID:
BBE18636
UniProt:
A0A5K7SAZ7
LinkDB
All DBs
Position
3122724..3123320
Genome browser
AA seq
198 aa
AA seq
DB search
MLKQNFKNDAEALLQMSDGNAAAYRFLFDHHFTDLCNFLLIYLHSKELSEEIALEIFTFI
WEKRQTLQIKANFKSFLFSSAKNRAISLYRKEQKKMFTSIDPGQSVFLDDSSSQQLMENN
ELREIINTAINKLPEKSKQIYQLAWEENLSHKEIAEQLGITPKTVENHVGIALRKLRESL
NPYYQQIFMLLLVQLFID
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagcaaaattttaagaacgatgcggaggccttgctgcaaatgtcggatggaaac
gccgcggcttatcgttttttgttcgaccaccacttcaccgatttgtgtaatttcctcctg
atttacttacattcaaaagagctttcggaagaaatagcgctcgaaattttcaccttcatt
tgggaaaaaagacaaacccttcaaatcaaagcgaactttaaatcatttcttttttcttcg
gctaaaaaccgagccataagtttgtaccggaaagaacagaaaaagatgtttacctcaatc
gatcccggacaatctgtttttctggacgattcaagctcgcaacaactgatggagaacaac
gagctacgcgaaattattaatactgcaatcaataaacttccggaaaaaagtaagcagatt
taccaattggcatgggaagagaacttgtcgcacaaagagattgccgagcaattgggaatt
actccgaaaacagttgagaaccatgtgggaattgctttgcgcaaacttcgtgaatcgctg
aatccttattatcagcaaatttttatgcttttgctggttcagctttttatcgactga
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