Aquipluma nitroreducens: AQPE_3731
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Entry
AQPE_3731 CDS
T09507
Name
(GenBank) ATP-dependent DNA helicase, RecQ family
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
anf
Aquipluma nitroreducens
Pathway
anf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AQPE_3731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anf03019
]
AQPE_3731
03400 DNA repair and recombination proteins [BR:
anf03400
]
AQPE_3731
Enzymes [BR:
anf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AQPE_3731
Messenger RNA biogenesis [BR:
anf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AQPE_3731
DNA repair and recombination proteins [BR:
anf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AQPE_3731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
KGK
Motif
Other DBs
NCBI-ProteinID:
BBE19546
UniProt:
A0A5K7SDK6
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All DBs
Position
4168347..4170251
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AA seq
634 aa
AA seq
DB search
MNQFVQILTKYWGYGAFRPLQEEIIRSVDQGKDTLGLMPTGGGKSVTYQVYSLSKPGICL
VITPLIALMKDQVENLNQRGIKALAIYSGMTAQEIKIAMDHAAWGDYKFLYLSPERIATE
RFRERINQLDVNLIAVDEAHCISQWGYDFRPSYLRIAELRDLLPDVPVLAVTATATEKVI
DDIQDQLKFRKKNVLRTSYYRSNLVYLVRNEEDKINYLVKAVQKAKGTGIVYVKSRKLTR
EISDLLRENEVSADYYHAGLPSKIRSAKQEAWKSGKNRVIVSTNAFGMGIDKADVRFVIH
LEAPDSVEAYFQEAGRAGRDGKPAWSVLLYNNSDKVKLERNVVKVFPEPDVIKRIYEAIC
NFYQLAVGFGKDQSFEFSMGAFASSFSFQITTVYNSLKILQREGYLELTDELDNPSKVYF
QVDRDDLYKFQVANAEFDGFIKLLLRSYTGLFTNYVSIDEELMAKRANVSPDLVYQFLTR
LRTQRIIDYIPQKKTPFIIFVKERIDLDRLKISKENYEDRKRDYIRRIDAVVHYASSGHK
CRSQLLLQYFGETESVRCGKCDVCMERNELNVSKYEFDTLCEQIKKVLLEPCFYENLLPK
IDGKPDNVVKVVRWLLENEKIVYRVDNRMEWRKG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
ttgaaccaatttgtacaaatattaaccaaatattggggatatggcgcattcaggccgctc
caggaagagatcatccgttcggttgatcaggggaaagatacacttggactgatgcctacc
ggtggtggtaaatcggttacttatcaggtgtattcgctttcgaaaccgggtatctgttta
gtaataactccactcatcgccctgatgaaagaccaggttgaaaacctgaaccagcgtgga
attaaagcattagcgatttattccggaatgacagctcaggaaatcaagattgccatggat
catgcggcctggggcgattacaagtttttatatctgtcacccgaacgtattgctacggaa
cgttttcgtgaacgtattaaccaattggatgtgaatctgattgctgtggatgaggcgcat
tgcatttcgcagtggggttacgatttccgcccatcgtatcttcggattgccgaattacgt
gatttattgcccgatgttccggttttagcagtaactgcaactgcaactgaaaaggtgatc
gacgatattcaggatcaactgaaattcagaaaaaaaaatgtgctacggaccagttattac
cgaagtaacctggtttatctggtcaggaacgaagaagataaaatcaattatctggtgaaa
gctgttcagaaagcaaaaggcaccggaattgtgtatgttaaaagccggaaactgacacgc
gaaatcagcgatttgcttcgggaaaacgaagtttctgccgattattaccatgccggactt
ccatcgaaaatcaggtcggctaaacaggaagcttggaaaagtggcaagaatcgggtgatt
gtctcgaccaatgcgtttggaatgggaattgacaaggctgatgtgcgctttgtgattcat
ctggaagcccctgattcggtagaagcgtattttcaggaagcgggtagggcagggcgcgac
ggaaaacccgcctggtcggtattgctgtacaacaacagcgacaaagtgaaactggagcga
aatgtggtgaaggtatttccagaacctgatgtgattaagcgcatttatgaggcaatctgc
aatttttaccaattggcggtaggctttggaaaagaccagtcgttcgagtttagcatgggt
gcatttgcatcaagcttttcgttccagattacaacagtttacaacagcctgaaaattctt
cagcgcgaaggttatctggaattgactgatgaactggacaatccctcgaaagtatatttt
caggtagatcgcgacgatctgtacaagtttcaggtggccaatgccgagttcgacgggttc
atcaaactgctgctgcgctcctacaccggactgtttaccaactacgtttcgattgacgaa
gaactgatggccaaacgcgccaatgtcagccccgatctggtttatcaatttcttacccgg
ttgagaacccagcgaatcatcgactacattccgcagaagaaaacgccgttcatcattttt
gtgaaagagcggatcgatctcgaccggctgaaaatcagcaaggaaaattacgaagaccgc
aagcgcgattacatccggcgaattgatgctgttgttcattatgcttcgtcaggacacaaa
tgtcgcagccagttgttacttcagtattttggtgaaaccgaatcggttcgctgtggaaaa
tgcgatgtctgtatggagcgcaacgagctgaatgtgagtaaatacgagttcgatacgttg
tgtgaacagatcaaaaaagtgctgctcgaaccttgtttttacgagaacctgttgcccaaa
atagacgggaaacccgacaatgtggtaaaagtagtgcgctggcttctcgaaaatgaaaag
atcgtttaccgcgtcgataaccggatggaatggcggaaagggtaa
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