Aquipluma nitroreducens: AQPE_4517
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Entry
AQPE_4517 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_4517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_4517
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_4517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_23
HTH_38
HTH_24
HTH_11
HTH_28
Terminase_5
HTH_40
HTH_Tnp_ISL3
HTH_3
Sigma70_r3
PF0610-like_N
DUF2774
HTH_10
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
BBE20326
UniProt:
A0A5K7SFR9
LinkDB
All DBs
Position
5041264..5041848
Genome browser
AA seq
194 aa
AA seq
DB search
MQVKDDNEYVECLKKDDFSAFDALFHKYSASLYAFALSITRDSFAAEEVTQLVFLKVWEK
REQIKEHLSFKSFLFSVAYHETISWLRKEKSEKMRISEFGRITDFQTSETEQSVEFRNIE
GLANQLIREMPEKRKEIFRLSREQGFSNKEIAEKLGISIKTVENQMTSALKYLREKLGKH
DILGLLFYFLMFHQ
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaaaagatgataacgaatatgtggaatgtttgaaaaaggacgatttttctgcc
ttcgatgcattatttcataaatattctgcaagtctttatgcctttgccctgagtattacc
cgtgactcttttgctgctgaagaagttacccaattggtcttcctgaaagtatgggagaag
cgggagcaaataaaagaacacctttcctttaaatcattcctgttttcagttgcttatcat
gaaacgatttcatggctccggaaggaaaagtcggaaaaaatgagaatcagcgagtttggc
cggataactgactttcaaacgagcgaaactgaacaatcggtcgaatttcgtaacattgaa
gggcttgccaatcaactgattcgtgaaatgcccgaaaaacggaaagaaattttcaggctt
agccgtgaacaaggtttttcaaacaaggaaattgctgaaaaattgggaatttcaattaag
actgtcgaaaatcaaatgacttcagccttgaaatacctgagagaaaagttgggtaaacac
gatattcttggcctgctgttttatttcctgatgtttcaccaataa
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