Aquipluma nitroreducens: AQPE_4527
Help
Entry
AQPE_4527 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_4527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_4527
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_4527
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
HTH_23
HTH_Tnp_ISL3
HTH_24
GerE
HTH_28
HTH_30
HTH_38
HTH_Tnp_1
HTH_20
DUF3798
HTH_17
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
BBE20336
UniProt:
A0A5K7SFS9
LinkDB
All DBs
Position
5055093..5055665
Genome browser
AA seq
190 aa
AA seq
DB search
MDDQNIWSKIVEGDVKALKVLHEKYYYQMWLWACKYSRNTTHTEELVSDCFIKLWERRQY
IFIEKSLKSYLYLMLRNQIVSQARKSKHQLVIGLEALPDVPDETTINHFDYYAGLYQAIQ
RMPEQRRRILELAAFESLSYKEVAARLNISVNTVKTQMGRAYQFLKEELDPTNFLLFHLL
IQTPKSQFNS
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atggacgatcagaatatttggagtaaaattgttgagggtgatgttaaggcgttgaaagtt
ttgcacgaaaaatattattaccagatgtggttgtgggcctgcaaatatagccgcaataca
actcatactgaagagttggtttctgattgtttcataaaactatgggagcgccgtcaatat
attttcatcgaaaaatctttaaaatcatacctttacctgatgctcaggaaccaaattgtg
agccaggcccgaaaatcaaaacatcagttggttataggacttgaagcccttcctgatgtg
cccgatgaaacgacaatcaaccactttgattattatgccggactttatcaggccattcag
cgtatgcctgagcaaaggcgaagaatacttgagctagccgccttcgaatcgctatcctat
aaggaagttgctgcacgtctgaatatttccgttaatacagtaaaaacgcaaatgggacga
gcatatcagtttctgaaagaagaacttgatccaactaattttttactctttcacctttta
atacaaactcccaaatcgcaatttaattcttaa
DBGET
integrated database retrieval system
