Aquipluma nitroreducens: AQPE_4663
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Entry
AQPE_4663 CDS
T09507
Name
(GenBank) RNA polymerase ECF-type sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
anf
Aquipluma nitroreducens
Pathway
anf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
anf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AQPE_4663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anf03021
]
AQPE_4663
Transcription machinery [BR:
anf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AQPE_4663
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
YMR265C_C
GerE
DUF2738
CalpD_C
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BBE20470
UniProt:
A0A5K7SFU0
LinkDB
All DBs
Position
5227372..5227935
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AA seq
187 aa
AA seq
DB search
MYFLIVILMTEFDYLFRKYHRRLLLYTLKFVERESDALDIVQNVFVAIWENGKYKQKEEL
VQAYLFNSIKNGCLNYLKHQKIVQKFENETSFQLLEMEAVYYQSGEKSLIERENLKQIND
AIDSLPAIYKEIIVLSRVEGLKNDEIATQLHLPIRTVETRVFRALSALREKISRKSFFIL
LSLRWLQ
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttgtatttccttattgtgatattgatgacagaattcgattatttgtttcgtaaataccac
cgtcgacttttactctatactctaaagtttgtagaacgtgaaagcgatgcccttgatatt
gtacaaaacgttttcgttgccatatgggaaaatgggaaatataaacaaaaggaagaattg
gttcaggcttatctgtttaattccattaagaacggttgcctgaattacctgaaacaccaa
aagattgtgcaaaagttcgaaaatgaaacttcatttcagttgttggaaatggaagcagta
tattaccaatcaggtgaaaaatcactcatcgaacgagaaaatctgaagcagataaatgat
gctattgattcattgccagctatttataaagaaattattgtgcttagccgggttgaaggc
ctcaaaaacgatgaaattgcgacccaacttcatttaccgattagaacggttgagacccgt
gtttttagggctttatctgcattaagagagaagatatcgcgaaaatcattttttattctc
ttgtccttaagatggttacaatag
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