Aspergillus niger (black aspergilli): An01g05350
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Entry
An01g05350 CDS
T01030
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ang
Aspergillus niger (black aspergilli)
Pathway
ang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
An01g05350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ang03021
]
An01g05350
03019 Messenger RNA biogenesis [BR:
ang03019
]
An01g05350
Transcription machinery [BR:
ang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
An01g05350
Messenger RNA biogenesis [BR:
ang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
An01g05350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_12
zf-CCCH_9
Motif
Other DBs
NCBI-GeneID:
4978357
NCBI-ProteinID:
XP_059603154
UniProt:
A0AAJ8E179
LinkDB
All DBs
Position
II
AA seq
264 aa
AA seq
DB search
MTADVSHAASRVLTSNSPRDPSYDEFSFVPFLRQSYGFGLASDVPVCKAYSEGHCPLGPA
CPDRHPTPSPPSTTHGSLVCKHFLKGLCKKGLKCEYLHEYNLRRMPECQSFSRSGYCPNG
DDCLYQHVREQARLPPCEHYDRGFCELGPLCAKRHVRRRLCQYYLAGFCPDGKACVDAHP
RWSENLPRPQIRVEKTEEELERERALIREEQEKEKEREREWRSERGRGGGFMRGRFVFTE
SSRYPAERHVYALFYTVESIMVAS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggacgtgagccatgcagcatcacgcgtgctcacctccaacagcccccgcgac
ccgagctatgatgagttctccttcgtacccttcctccgccagagctatggcttcggcctt
gccagtgatgtgcccgtctgcaaagcctacagcgaaggccactgccctctaggaccagcc
tgtcccgatcgccacccaaccccatcgccaccatcaaccacacatggatctctggtctgt
aaacatttcctcaagggactctgcaaaaagggtctcaagtgcgagtatcttcatgaatac
aacctccgtcgcatgcccgaatgccagtccttctcgcggtccggctattgtcccaatggc
gatgactgcctgtatcagcacgtgcgggagcaggcgcgtctgcccccttgtgaacactac
gaccggggattctgcgagctgggacccctgtgtgccaagcggcatgttcgtcggcgcttg
tgtcaatactacttggctgggttctgtccggacggcaaggcctgcgtggatgctcacccc
cggtggtcggagaaccttccccgtccgcagatccgggtcgagaagaccgaagaagagctg
gaacgggaacgggcgttaattcgggaggaacaggagaaggagaaggagcgtgagagggag
tggaggagtgagcgtggtcgtggtggggggttcatgcggggtcgatttgtgtttacagaa
tcgtcgagatacccagctgagaggcatgtttacgctttattttacacggttgaatctatc
atggttgcatcttag
DBGET
integrated database retrieval system