Aspergillus niger (black aspergilli): An01g07460
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Entry
An01g07460 CDS
T01030
Name
(RefSeq) uncharacterized protein
KO
K12880
THO complex subunit 3
Organism
ang
Aspergillus niger (black aspergilli)
Pathway
ang03013
Nucleocytoplasmic transport
ang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
An01g07460
09122 Translation
03013 Nucleocytoplasmic transport
An01g07460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ang03019
]
An01g07460
03041 Spliceosome [BR:
ang03041
]
An01g07460
Messenger RNA biogenesis [BR:
ang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
An01g07460
Spliceosome [BR:
ang03041
]
Complex C
Other components
EJC/TREX
An01g07460
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
An01g07460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Prp19
Beta-prop_WDR3_1st
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
WD40_Gbeta
WDR55
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Cytochrom_D1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Tricorn_2nd
DSE1_N
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_Vps41
eIF2A
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
WD40_RFWD3
TP_0598_N
Beta-prop_WDR41
PAC11
Beta-prop_Nup120_160
Beta-prop_ACSF4
CFAP251_N
Beta-prop_DCAF12
PALB2_WD40
Beta-prop_SPT8
TRM82_WD
Motif
Other DBs
NCBI-GeneID:
4978488
NCBI-ProteinID:
XP_059605897
LinkDB
All DBs
Position
II
AA seq
312 aa
AA seq
DB search
MMEDDGKSRIRTIAWNPTGQLIATGSADRTLRIWNPERSQVKYSTELRGHTAGIEKVVFN
PVRDSELASCSTDGTVRVWDVRSKTCVSRLDVGGEAFTLSWSADGRVMIVGRKKPTFTPS
TYTALEPHPQPIQTNATTFSHHMSTPSSPDLHLFATTGEGTVKIISYPSFANLHTLHAHT
SACLSISLAPTGRYLAVGGSDALISLWDTTDWICKRTVSSNNGGAVRGVSWSFDGRFICG
ACDEVGCGGNGLEIFHAETGESVHTVPTGGNANSGIPAVAWHPSRYWLAYSTTADGSGPG
GLRIVGAAGGSL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacgacggaaaatctaggattcgcacaatagcctggaaccctaccggtcaa
cttattgccaccggctccgcagaccgtacccttcggatctggaaccctgagcgttcgcaa
gtgaaatactccaccgaactgcgcggccatactgctggaattgagaaagtcgtgttcaac
cccgttcgagactccgaactggccagctgctctacggatggaaccgttcgcgtttgggat
gtccggtcaaagacctgcgtcagtcgtctagacgtcggaggcgaggcattcaccttgtcc
tggtctgctgatggaagggtaatgatcgttggcaggaagaagcccaccttcacaccatca
acctacacagccctagaaccacaccctcagcccatccaaacaaacgcaacgaccttctca
catcacatgtccaccccttcctccccagacctccacctcttcgccacgaccggcgaaggc
accgtcaaaatcatctcttacccgtcctttgccaatctccacacccttcacgcccacact
tctgcttgcctttccatctccttagcacctacaggtcgctacctcgccgtcgggggcagc
gacgccctcatctccctatgggatacaacggactggatctgcaagcgtactgtctcgagc
aataacggtggagccgtgcgtggcgtgagctggagcttcgacggtagattcatctgcggc
gcttgtgatgaggtaggctgtggtggtaatgggttggagatcttccatgcggaaacgggt
gagagtgttcataccgttcctacgggaggaaatgccaattcggggattccggctgtcgcg
tggcatccttcgaggtattggcttgcatattctactactgcggatggatcgggcccaggc
ggtttgagaattgtaggggctgcgggtggaagtttgtag
DBGET
integrated database retrieval system