KEGG   Aspergillus niger (black aspergilli): An01g12330
Entry
An01g12330        CDS       T01030                                 
Name
(RefSeq) uncharacterized protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
ang  Aspergillus niger (black aspergilli)
Pathway
ang03018  RNA degradation
ang03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ang00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    An01g12330
  09123 Folding, sorting and degradation
   03018 RNA degradation
    An01g12330
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ang03019]
    An01g12330
   03041 Spliceosome [BR:ang03041]
    An01g12330
Messenger RNA biogenesis [BR:ang03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     An01g12330
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     An01g12330
Spliceosome [BR:ang03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    An01g12330
SSDB
Motif
Pfam: LSM FoP_duplication DUF150_C
Other DBs
NCBI-GeneID: 4977137
NCBI-ProteinID: XP_001389639
UniProt: A0A3F3R623 A2QAQ0
LinkDB
Position
II
AA seq 136 aa
MSERGSFRGGGRGRGGGYDRSGGRGAHRGGGAGGGAHQQQQQEKPKKENILDLNKYMDKE
VRVKFNGGREVIGTLKGYDQLMNLVLDDVKESMRDDEGNENTRSLGLVVARGTIIVLISP
ADGSEEIANPFVQPEE
NT seq 411 nt   +upstreamnt  +downstreamnt
atgtccgaaagaggctcgttccgtggaggtggccgtggccgcggcggaggctatgaccgg
tctggcggtcgtggcgcccacagaggtggcggtgctggtggcggtgcccaccagcagcag
cagcaggagaagcccaagaaggaaaacatcctcgacctcaacaagtatatggacaaggag
gtgcgcgtcaagttcaatggcggtcgtgaggttattggtacgctcaagggatacgaccaa
cttatgaatctggtcctggacgatgtcaaggaatccatgcgcgatgatgagggcaacgag
aacactcgctctctgggtctcgtcgtggcccgtggcaccatcatcgtcctgatctcgccc
gccgacggcagcgaggagattgccaaccccttcgtgcaacccgaagagtaa

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