Aspergillus niger (black aspergilli): An01g12330
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Entry
An01g12330 CDS
T01030
Name
(RefSeq) uncharacterized protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ang
Aspergillus niger (black aspergilli)
Pathway
ang03018
RNA degradation
ang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
An01g12330
09123 Folding, sorting and degradation
03018 RNA degradation
An01g12330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ang03019
]
An01g12330
03041 Spliceosome [BR:
ang03041
]
An01g12330
Messenger RNA biogenesis [BR:
ang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
An01g12330
mRNA degradation factors
5'-3' decay
Lsm complex
An01g12330
Spliceosome [BR:
ang03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
An01g12330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
FoP_duplication
DUF150_C
Motif
Other DBs
NCBI-GeneID:
4977137
NCBI-ProteinID:
XP_001389639
UniProt:
A0A3F3R623
A2QAQ0
LinkDB
All DBs
Position
II
AA seq
136 aa
AA seq
DB search
MSERGSFRGGGRGRGGGYDRSGGRGAHRGGGAGGGAHQQQQQEKPKKENILDLNKYMDKE
VRVKFNGGREVIGTLKGYDQLMNLVLDDVKESMRDDEGNENTRSLGLVVARGTIIVLISP
ADGSEEIANPFVQPEE
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaagaggctcgttccgtggaggtggccgtggccgcggcggaggctatgaccgg
tctggcggtcgtggcgcccacagaggtggcggtgctggtggcggtgcccaccagcagcag
cagcaggagaagcccaagaaggaaaacatcctcgacctcaacaagtatatggacaaggag
gtgcgcgtcaagttcaatggcggtcgtgaggttattggtacgctcaagggatacgaccaa
cttatgaatctggtcctggacgatgtcaaggaatccatgcgcgatgatgagggcaacgag
aacactcgctctctgggtctcgtcgtggcccgtggcaccatcatcgtcctgatctcgccc
gccgacggcagcgaggagattgccaaccccttcgtgcaacccgaagagtaa
DBGET
integrated database retrieval system