Aspergillus niger (black aspergilli): An05g00290
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Entry
An05g00290 CDS
T01030
Name
(RefSeq) uncharacterized protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
ang
Aspergillus niger (black aspergilli)
Pathway
ang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
An05g00290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ang03041
]
An05g00290
Enzymes [BR:
ang01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
An05g00290
Spliceosome [BR:
ang03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
An05g00290
Complex C
U4/U6.U5 tri-SnRNP related factors
An05g00290
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_N
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
nSTAND3
Cas3-like_C_2
AAA_30
SRP54
PWI
T2SSE
Sigma54_activ_2
ABC_tran
AAA_23
Motif
Other DBs
NCBI-GeneID:
4980765
NCBI-ProteinID:
XP_001390603
UniProt:
A0A3F3RDQ9
A2QKI0
LinkDB
All DBs
Position
VII
AA seq
1128 aa
AA seq
DB search
MDHRTFVSDSLLRLTNASDPTVVDFVLATASSAKSASALQDKLLPFLDGSSDDISSFCGE
LYRRVGVRAGSSATSANVASKERSDAVSSKKKYRLLEMEEDDVPDARGSLGPVNVEAERD
RRRRRDKDRSNGRSSKDGESGRSRWEKDESRKRDRSREEESRDRPRTKKVRRRNADDFDD
RWGDEEIPEDELYEDDEQAGEFEESPSKRSRLEDGSASPRSNASEELDPETKKEQDRKRD
LEERDEFAKRLAKKDDGKTKKIVEDRTRSGEAARRRALADDASARAAVMPDLRMRSRQEY
LKKRETERLALLRRQVAEETAELRDNPSLTRKEKEEFARNREVLRIAEERLRIDDYRDGY
MMPEDYITEKGKIDRKKKEDALYKRYVDRDDAGQERFITEHEEWEMEQTAKAKAQINRAE
FVDEGNYEYVFDDSQKINFVVDAKMEGTRKPMTQEQRRLQEQIDAAEKKAQSMEDTRKSL
PIYQFRDQIIQAVHDHQVLIIVGETGSGKTTQIPQYLHEAGFTKGGMKVGCTQPRRVAAM
SVASRVAEEMGVKLGNEVGYAIRFEDNTSDKTVLKYMTDGMLLRELLTEPDLGQYSALMI
DEAHERTVPTDIACGLLKDIAKARPDLKLLISSATMDAQKFQQYFDDAPIFNIPGRRYPV
DIHYTSQPEANYLAAAITTVFQIHVTQGSGDILVFLTGQEEIEAAEQSLQETSRKLGNKI
PEMIICPIYANLPSELQTKIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFVKENV
FNPRTGMESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEESTTPEIQRTN
LSSVILMLKSLGIDQLLDFDFMDPPPAETIIRALEQLYALGALNDRGELTKIGRQMAEFP
TDPMLAKAILAADKYGCVEEVLSIVSMLGEASALFFRPKDKKIHADSARNRFTIKDGGDH
LTLLNIWNQWVDSDFSYVWAKENFLQQRSLTRARDVRDQLAKLCDRVEVSVSTCGSNNMQ
PIQKAITAGFFPNAARLQRGGDSYRTVKNGQTVYLHPSSTLFEVNPRWVIYFELVLTSKE
YMRSNMPLQAEWLVEVAPHYYKKKDLETLGLEKKMAKGQGAAGEKSRN
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atggaccatcgaactttcgtgtcggattcgctcctccgccttacgaacgcgtcggatcct
actgtcgtcgacttcgtgcttgccaccgccagttccgctaagtcagcttccgctttgcaa
gacaagctactccctttcctggacggcagctccgatgacattagctcgttttgcggcgaa
ctttacagacgggttggggtgagggccgggtccagcgctaccagtgccaatgtggcaagt
aaagagcgcagtgatgccgtgtcatcaaagaagaaatatcgactgctagagatggaggag
gatgacgtaccggacgcccgggggtcactaggccctgtgaatgtcgaggcggaacgggac
agacggcgacgcagagataaagatcggagcaatggacgcagcagtaaggatggcgagagc
ggtcgcagccgctgggaaaaggacgagagccgcaaacgcgatcgcagtcgggaagaggaa
tcgcgcgaccggccccggacgaagaaggtacggcgacggaatgccgatgactttgatgat
cgctggggagatgaggagatacctgaagatgagctatacgaggatgatgagcaggcgggc
gaatttgaggagtcgccttcgaaacggagtcggttagaggatgggtctgcgtcgccacgg
tcaaatgcctctgaggaattggatccggagacgaagaaggaacaagaccggaaacgggat
ctcgaagaacgagatgagtttgcgaaacgccttgctaagaaggatgatggcaaaacgaag
aagatcgtcgaggatcggacaaggtctggtgaggctgcgcggcgacgagcgttggcggat
gatgcgtctgcgcgggcggctgtcatgccagacctgaggatgcgctctcgacaggaatat
ttgaagaagcgtgagacggagcggttggccctcttgcgcagacaggtcgccgaggagacg
gcagagctgcgcgataatcccagtttgactcgcaaggagaaggaggagttcgcgcgcaat
cgagaagttctgcggatcgcggaggagcggttgcggattgacgactatcgtgatggttac
atgatgcccgaggactacattacggagaagggcaagatcgatcggaagaagaaggaggac
gcgctctacaaacgttatgtggatcgtgatgacgctggtcaagagcggttcattacggag
cacgaagaatgggaaatggagcagacagccaaggctaaggcacagatcaatcgggctgaa
ttcgttgacgagggcaattatgagtatgtgtttgacgattcgcagaagatcaacttcgtt
gtggacgccaagatggaaggcactcggaagcctatgacgcaggagcagcgcaggcttcag
gagcagattgatgcggcggagaagaaagcacagtcgatggaggacacgcgaaagagcctg
cccatctatcaatttcgagaccagatcattcaggcagtgcacgaccaccaagtcttgatt
atcgtgggagagactggttcgggtaagacgacgcagattccgcagtaccttcacgaggct
ggattcaccaagggcggcatgaaggttggatgtacccaaccacgtcgagttgctgccatg
agtgtggcttctcgagtggcggaagaaatgggggtgaagctggggaacgaggttggctac
gccattcgattcgaggacaacaccagcgacaagacagtgctcaagtacatgacggatggt
atgttgctgcgtgagctattgacggagcccgatctcggccagtactctgcattgatgatt
gatgaagcccacgagcgaacggtgcccacggacatcgcctgtggtcttctgaaggatatt
gcgaaggcacggccagatctcaaactgctgatctcctccgccacgatggatgctcagaag
ttccagcagtattttgatgatgctccgatcttcaacatccccggtcgtcggtaccctgtc
gatattcattacacatctcagccggaagcgaattacctggctgcagccatcacgacggtc
tttcaaatccatgtcactcagggatctggagatatcctcgtcttcttgacaggtcaagaa
gagattgaggcggcggaacagagtctccaggaaacgtcacgaaaattagggaacaagata
cccgaaatgatcatatgtccaatctacgccaacctcccgtccgagctacagactaagatc
ttcgagccgacgccgccaaaggcacggaaggtcgtgttggcaacaaacattgctgaaacc
agtttgaccattgacggcattgtctacgtgattgacccaggatttgtcaaggagaatgtc
ttcaacccgcggacgggtatggaaagtttagtcgtaactccctgctcgcgagcttccgcc
aaccaaagagccggtcgtgctggacgtgttggtccgggcaagtgtttccgactctacacc
aagtgggcatactacaatgagttggaggaaagcacaactcccgagatccagcggaccaat
ctgagcagtgtcatcttgatgctgaagtccctggggatcgaccagctgctggacttcgac
ttcatggaccctcctccggcggagaccatcattcgtgcgctggagcagctgtatgcgttg
ggggctctgaacgatcgaggcgagctgacaaagattgggcgacagatggccgaattccca
acagatcccatgctggccaaggcgattctagcagccgataaatacggctgtgtggaagaa
gtgttgtctatcgtgtcgatgctgggcgaggcgagcgcgctcttcttccgacccaaggac
aagaagattcacgcggacagcgcgcggaatcgcttcaccattaaagatggcggcgaccat
ctcacgctgctcaatatctggaaccaatgggtcgactccgacttcagctatgtctgggcc
aaggaaaacttcctccagcagcggagtctgacgagagcgcgcgatgtccgcgaccagctc
gcgaagctatgtgatcgcgtcgaggtgtccgtgagcacgtgcggctccaacaatatgcag
ccgattcagaaggccatcacagccggattcttcccgaacgcggcacgactgcagcgaggc
ggcgacagctatcgcacagttaagaatggacagacggtttacctccacccgtcgagcacg
ctgttcgaagtcaacccgcggtgggtgatttacttcgagctggtgctgaccagcaaggag
tatatgcgcagcaacatgccattgcaggcggagtggctggtcgaggtggcgccacactat
tacaagaagaaggatctggagacgctggggttggagaagaagatggcgaaggggcagggg
gcggcaggcgaaaagagtcggaattga
DBGET
integrated database retrieval system
