Aspergillus niger (black aspergilli): An07g10080
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Entry
An07g10080 CDS
T01030
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
ang
Aspergillus niger (black aspergilli)
Pathway
ang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
An07g10080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ang03021
]
An07g10080
03019 Messenger RNA biogenesis [BR:
ang03019
]
An07g10080
Transcription machinery [BR:
ang03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
An07g10080
Messenger RNA biogenesis [BR:
ang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
An07g10080
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
Pfc11_Clp1_ID
zf_PCFS4
VHS
DUF7340
UBZ_FAAP20
Zn_ribbon_ISL3
Motif
Other DBs
NCBI-GeneID:
4982277
NCBI-ProteinID:
XP_059603838
UniProt:
A2QPN7
LinkDB
All DBs
Position
IV
AA seq
657 aa
AA seq
DB search
MSSGLASDEVAEDYKNSLEDLTNNDRFQISNLTVIAKENTEHAMAISRVLENHIRTTPPA
QKLPALYVVDSIVKNVGTPYTLFLGRNLYQTFMNAYTLVDSQTRKKLDEMLKTWKEPVPG
SLDTRPVFPPEITRSIESALIKARTAALQQQQARTQQDILARGRVGTPPAWNSTPTPPQG
MGRHPPAANQALPMHYQRNGSGHGYPPSGESYSSRGTPTPQAQPRSTEVDLAVLNRDIEA
LIATARNDFANNPLDPSIQQRLKALLDLQGILQRQELTQEQLKLVRDQVSALAPKPAMPA
PQAMAPSVPAVSTPPMATPPAQTLSQPLQQLLNPGTLAGLLKATATRQQPTPPPQIHNIL
PQMPTNTTAPQPSVSAAPENPLIAALRAQGLLPPASAPPAPFTAAPPPNVTPAFPLIVPG
QVRVTPPVATPQTQQGTSNAQINVQMSTASIKIPRQMLISSLYETRSNRCGTCGQRFFAT
EEGKEKKARHLDWHFRTNQRMSEAARRAQNRSWYVDERDWIKSREAGDEQDLAETEASAE
GVAGADGAATKKGPPKQWIHAPNDATLRNTPCPICQEKFESTWSEDVQDWIWQDAVKVGS
RVYHASCYAEVTNNGPTPASRGTPSGRTGTPESVLGKRKAEGTDSPGSNVRIKTEPV
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccgggttggcctccgacgaagttgccgaggattacaagaattccttggaagat
ctaaccaacaatgacaggtttcagatcagcaatctgactgtcatagccaaagaaaacact
gaacatgcgatggccatctcccgcgtgttggagaaccacattcgaacaactccgccggct
cagaagttgcccgccttgtatgtagtcgattcgattgtcaagaacgtaggcacgccctac
actctgttcctgggtcgcaatctgtatcagacctttatgaacgcctacacactggtcgat
tcgcagacgcgcaagaagttggatgagatgctcaaaacctggaaggagccggttccgggt
tccctcgacaccaggcccgtttttcctccagaaattactcgcagtatcgagagtgctctg
atcaaagcaaggactgcagcgcttcagcagcagcaggcccgaacccaacaagacatcctc
gctcgcggtcgagttggcactcctccagcttggaacagcactcctacaccaccgcaaggc
atgggccgccatccacctgcggcaaaccaggctttacccatgcattaccagcgcaatggc
tctggtcacggatatccaccatcgggtgaatcgtactcttcgcggggaacgccaactccc
caagcccagccacgctcaacagaggttgatctcgcggttctcaaccgagatatcgaggct
cttattgccaccgccaggaacgattttgcaaacaatccactggacccttcgatacagcaa
cgactgaaggctcttctagatcttcagggtatcttgcaacggcaagaacttacccaggaa
caattgaagctcgtccgcgaccaggtttcagctctcgctccgaagcctgcaatgccggct
cctcaggctatggctccaagtgtcccagccgtttcaacgccccccatggctactcctcca
gcccaaacactttcgcaacctttacaacagcttctcaatcctggcacgcttgccgggctc
ctcaaagctactgctacacgtcagcagccgactccgccacctcaaattcacaatatccta
ccgcagatgcccactaataccaccgcgccgcagccttccgtcagcgccgcaccggaaaat
cctctcattgcagccctaagagcacagggcttactgccaccggcctcggcacctccagcc
cctttcactgctgctccgccgccaaatgtcacgcctgcttttccattaattgtacctggt
caggtgcgagtcacgcctccagtcgcaacaccgcagacacagcaaggtacatccaatgcg
cagatcaacgttcaaatgagcacagcgtccatcaaaatccctcggcaaatgctgatctcc
agcctctacgagacgcggtcaaaccggtgtggaacatgcggtcaacgtttctttgcaaca
gaggaagggaaggagaagaaggctcgccatttggattggcacttccgcaccaaccagcgc
atgtctgaggcagctaggcgggcccagaaccgcagctggtacgttgatgaacgggattgg
attaaatctcgtgaggcgggtgacgaacaagatcttgcggagacggaggcctccgctgag
ggtgttgctggtgctgacggcgctgcgactaagaaggggcctcccaagcagtggatccac
gccccgaatgacgcaacattgcgaaacaccccttgccctatctgccaggagaagtttgag
tcgacatggtcggaggatgtgcaggactggatctggcaggatgcggtcaaggtgggaagt
cgcgtgtaccatgctagttgctatgccgaagttaccaataacggacctacgccagccagc
cgggggacgccatcaggacgaactgggactcccgagtctgttttgggcaaacgcaaggcc
gaggggaccgactctcctgggtccaatgtgcggattaaaacagagcccgtgtga
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