KEGG   Aspergillus niger (black aspergilli): An08g00340
Entry
An08g00340        CDS       T01030                                 
Name
(RefSeq) uncharacterized protein
  KO
K12601  superkiller protein 8
Organism
ang  Aspergillus niger (black aspergilli)
Pathway
ang03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ang00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    An08g00340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ang03019]
    An08g00340
Messenger RNA biogenesis [BR:ang03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     An08g00340
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz ANAPC4_WD40 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EML WDR55 Beta-prop_Vps41 Beta-prop_TEP1_2nd Beta-prop_HPS5 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_Nup120_160 WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_TEP1_C Beta-prop_SPT8 eIF2A Beta-prop_IFT140_2nd Cytochrom_D1 Beta-prop_SCAP KNTC1_N DUF7165 Beta-prop_EIPR1 Nucleoporin_N WD_LRWD1 VID27 B-prop_COPA_B_2nd PEP5_VPS11_N Beta-prop_IFT122_2nd
Other DBs
NCBI-GeneID: 4982316
NCBI-ProteinID: XP_059603867
UniProt: A0AAJ8BTZ7
LinkDB
Position
VIII
AA seq 311 aa
MSKQYLSCGSADNAHPVDIFALAVTDKQILSASGTSSLKVHSTTDPDFPLVQSIDGAHKV
GCHHVVTNGNGLRAVSIGFGGEIMIWSCHDGVWAKDEGASVNKATPADVWAIALSEDGQY
LAGVTQDGHIKVWDLDTNGEEIRDYETKGSFGTCIDLSADGRFIASGHENGSVYIFSTES
GRMPFSLSGLVKPVRAVAFSPGGKFLAAAGDSKVIVLYDTSSGEQVASLSGHTAWVMSLS
WSPTGEYLLSGSFDGKVKVWSIDTRACVATHSETEKAIWSVKWLAKIGRSVGFATAGANR
SISFYREATGG
NT seq 936 nt   +upstreamnt  +downstreamnt
atgtctaaacaatatctctcttgcggttctgcagacaatgcccaccccgttgatatcttc
gcactggccgtgactgacaagcagatcttgtcggcctcgggtacttcttcccttaaagtc
cactcgactacagaccccgattttccgctagtacagtctattgacggtgcccataaagtt
gggtgccatcatgtggtcactaacggaaatggcttgagggccgtcagtatcggatttggc
ggtgagatcatgatttggtcttgtcacgacggagtctgggcaaaggatgagggggcctct
gtcaacaaggcgacgcctgcagatgtctgggccatcgctttatccgaagatggacaatat
cttgccggtgttacgcaagatggtcatattaaggtgtgggatctggacaccaatggcgag
gaaatccgagactatgaaaccaaaggtagcttcggcacctgcatagatttgtctgcggat
ggccgcttcatagcgagcgggcatgaaaatggtagtgtttacattttcagtacagaaagc
ggacgcatgccattcagcctatcaggcctggttaaacctgtacgagctgttgcattctcc
cctgggggaaagttccttgctgctgctggagattccaaggtaattgtgctttatgacacg
tcctctggtgaacaagtggcaagtctctcggggcacaccgcatgggtcatgtcgctttcg
tggagccccacgggggagtatctcctcagcgggtcgtttgatggaaaggtcaaagtttgg
tcaatagacacgagagcatgtgtggccacccattccgaaacagagaaagcaatatggagt
gtcaagtggctagcgaagatcgggagatcagtaggatttgccacggcgggtgcaaaccgg
agcatatcattctaccgtgaagccactggtggttag

DBGET integrated database retrieval system