Aspergillus niger (black aspergilli): An09g03480
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Entry
An09g03480 CDS
T01030
Name
(RefSeq) uncharacterized protein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
ang
Aspergillus niger (black aspergilli)
Pathway
ang03018
RNA degradation
ang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
An09g03480
09123 Folding, sorting and degradation
03018 RNA degradation
An09g03480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ang03019
]
An09g03480
03041 Spliceosome [BR:
ang03041
]
An09g03480
Messenger RNA biogenesis [BR:
ang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
An09g03480
mRNA degradation factors
5'-3' decay
Lsm complex
An09g03480
Spliceosome [BR:
ang03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
An09g03480
Complex C
U2 snRNP components
An09g03480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
LRR_9
Hfq
SM-ATX
Gemin7
Motif
Other DBs
NCBI-GeneID:
4983884
NCBI-ProteinID:
XP_001393665
UniProt:
A0A100IM14
A2QTW3
LinkDB
All DBs
Position
I
AA seq
98 aa
AA seq
DB search
MLFFSFFKTLTNQTVTIELKNDIRIRGTLKSVDQYLNIKLDDVDVLDLDKYPHLSSVKNM
FIRGSVVRYVMLPRSEVDIGLLEDATRREAANQAGKAR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgctcttcttcagcttcttcaagaccctaaccaaccaaacggtgaccatcgaactcaag
aacgacattcgcatccgcggcaccctcaaatccgtcgaccagtacctgaacattaagctg
gacgatgtggacgtcctggatctggataaatacccgcacttgtcgtccgtaaagaatatg
tttattcgtggtagtgtggtgcggtatgttatgctgccgaggtcggaggtggacattggg
cttttggaggatgcgacgaggagagaagctgcgaaccaggctgggaaagctcggtga
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