Aspergillus niger (black aspergilli): An16g03340
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Entry
An16g03340 CDS
T01030
Name
(RefSeq) uncharacterized protein
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ang
Aspergillus niger (black aspergilli)
Pathway
ang03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ang00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
An16g03340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ang03019
]
An16g03340
Messenger RNA biogenesis [BR:
ang03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
An16g03340
U7-dependent histone pre-mRNA processing factors
An16g03340
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
4988728
NCBI-ProteinID:
XP_059602737
UniProt:
A0AAJ8E0Q8
LinkDB
All DBs
Position
V
AA seq
865 aa
AA seq
DB search
MFTFTPLLGAQSASSKASQSILELDGGIKILVDVGWDDTFDPLDLQELEKHVPTLSLILL
THATPAHIGAFAHCCKTFPLFTQIPVYATSPVIALGRTLLQDLYASSPLAATFLPKATEA
THAGRILLQPPTAEEIARYFSLIHPLKYSQPHQPLPSPFSPPLNGLTLTAYNAGHTVGGT
IWHIQHGMESIVYAVDWNQARESVVAGAAWFGGSGASGTEVIEQLRKPTALVCSTRGGER
FALPGGRKKRDDLLLDMIRSTIAKGGTVLIPTDTSARVLELAYALEHAWRDAAGSGQGDD
VLKGAGLYLAGRKANTTMRLARSMLEWMDENIVREFEAAEEGKGVGPFTFKHLRILERKK
RLEKILSDQKPKVILASDTSLDWGFAKDSLRLVAEGANNLLLLTEPLHKERITEGQESTH
RKTLGSMIWQWYEERKDGVALEKASDGEMLEQENLDNAADALDDRSSSTSEDSETEQQGR
VLNFSTSLAHSNRNKLGLSDEDLGVNILLRRKNVYDYDVRGKKGRERMFPYVAPRKKGDE
FGEFIRPEDTADELSLAEDGEVDAAVSSEDEVEGQSFEGPAKAVYEKATLTINARLAYVD
FTGLHDKRSLEMLIPLIQPRKLILVGGMKQETTALATECQKLLAAKSGMDVSAADSAVIF
TPVNGEVVDASVDTNAWMVKLSNNLVRRLKWQHVRSLGVVTLTAQLRGPEQAVLEDSTEE
NPSKKPKLLEEEKKEEGGSTEVATNAPPEGAKPSADKSEVYPLLDVLPVNMAAGTRSMTR
PLHVGDLRLADLRKIMQGAGHTAEFRGEGTLLIDGMVAVRKSATGRIEIEASAQSAAATN
LGRGGGSFLAVKQKIYEGLAVVSGS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atgttcacctttacccctcttctcggcgcacagtctgcgtcatcaaaggcttcacaatcg
atcctcgagcttgatggaggaatcaagatccttgtggacgtcggttgggatgacaccttc
gatcctctcgacctgcaggaactcgaaaaacatgtcccgaccttgtcgctcattcttcta
acccacgctacacccgctcatattggtgcctttgcccattgttgcaagaccttccctctc
ttcacgcaaattcccgtctacgctacgagtcccgtcattgcgctcggtcgcacgttgcta
caggatttatacgcctcttctccgctggccgcaacattcttacccaaggccaccgaagct
actcatgccgggcgcatcctcctccaacctcctaccgccgaagaaatcgcccggtacttc
tctttgatacacccgttgaaatactcacaaccacaccaaccgcttccgtcaccattctcc
ccgcccttgaacggccttacgctgaccgcatacaatgctggacacaccgttggtggtacg
atatggcatatacaacatggcatggagtcaattgtctacgcggtcgactggaaccaagct
cgagaaagcgttgtcgcgggcgctgcctggtttggaggctccggtgccagtggaacggag
gtcatcgagcagctgcgcaaacctacggcgctggtatgcagtactaggggaggtgaacgc
ttcgcgctgcccggaggcaggaagaagcgggatgacttgctgctggacatgatccggagc
accatcgccaagggtggcacagtgctgattcctacggataccagcgctcgcgtgctggag
ctggcttatgcgctggaacatgcctggcgcgatgcggcaggctctggccagggcgatgat
gtactgaaaggagccgggctatacctggccggtcggaaagctaatactacgatgcgactg
gcaaggagtatgttggagtggatggacgaaaatatcgtgcgagagtttgaggctgctgag
gaaggaaagggcgtgggaccttttacgttcaagcatctccgaattttggaacgcaagaag
cgattagagaagatcctgtccgaccaaaagcccaaggtaattctggcttccgatacgtcg
ctggattggggattcgcgaaggactctctacgtctggtggcggaaggtgccaacaaccta
ctgctcttgacggagcctctgcacaaggagaggatcacggagggccaggagagcacccac
aggaagacactcggcagtatgatctggcagtggtatgaagaacgaaaggatggcgttgct
ctggaaaaggcatcggacggcgagatgctggagcaggaaaaccttgataatgccgccgac
gcgctcgacgaccggtcaagctctacatcagaagactcggagacggaacaacagggccgc
gtcctgaatttctccacctcgttagcacactccaaccgcaacaaactcggcctcagcgat
gaagaccttggcgtcaacattcttctacggcgtaagaatgtctacgactacgatgtacga
ggcaagaaaggtcgcgagcgcatgtttccgtatgtggcaccccgaaaaaagggggacgag
tttggcgagttcatccggcctgaggacactgctgacgaactgagcctcgccgaagatggc
gaggtggatgccgcggtatcttcggaggatgaggtggagggacagagctttgaggggcca
gcgaaggcagtatacgagaaggctacgctgaccataaatgctcggctggcatacgtggac
tttacgggactacacgacaagcgcagtctggagatgctcatcccgctcatccagccccgg
aagctgatcctggttgggggtatgaaacaggagacgaccgcgttggcgaccgaatgccag
aagctcctggcagccaaatccggaatggacgtttcggccgcagactcggcagtcatcttc
acgccggtcaacggcgaggttgttgacgccagcgtcgacaccaacgcatggatggtcaag
ctgagcaacaacttggtccggcgtttgaagtggcagcacgtacgcagcctgggagtggtc
acgctcacggcgcagttgcgggggccggaacaggccgtcctggaggactccacggaagag
aaccccagcaagaagccaaagctgttggaagaggagaagaaggaagaaggaggtagcacc
gaggtcgcgacgaacgcaccaccagagggggccaaaccatcagctgacaagtctgaggtg
tacccactgctggatgtgctgccggtcaacatggcggcgggaacgcgatccatgacccgg
ccgctccatgtgggcgacctgcggctggcagatttgcgcaagatcatgcaaggggccgga
cacacggcggaattcaggggcgagggaacgctccttatcgatgggatggtggcagtgcgg
aagtcggcgacggggcggattgagattgaagcatcggcgcagtctgcggcggcgacgaac
ctgggacgaggaggagggagcttcttggctgtgaagcagaagatttatgaaggattggct
gttgtgtcggggagttag
DBGET
integrated database retrieval system
