Aspergillus niger (black aspergilli): An16g03540
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Entry
An16g03540 CDS
T01030
Name
(RefSeq) uncharacterized protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ang
Aspergillus niger (black aspergilli)
Pathway
ang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
An16g03540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ang03019
]
An16g03540
Messenger RNA biogenesis [BR:
ang03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
An16g03540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
DUF6987
Motif
Other DBs
NCBI-GeneID:
4988748
NCBI-ProteinID:
XP_001397666
UniProt:
A2R7H4
LinkDB
All DBs
Position
V
AA seq
782 aa
AA seq
DB search
MDSTADFGSLQQRVQSSLMQVTRTAGQLSAEDLDFHRTSNAEVSDSLDEQSNRLLSLTSS
ILKAATAGTDVSAPTLDDEDSLEDNWRGVVDVIDALLEKADACLDEFTGVIKKLSPSQQD
QAAAAAAKASKKQPAKFPTIYDYGPSKIPKPQLLFERKADNTDTAPFKPLLKTKPHAVVP
LKDSLKLSDSAVGYVNPYEKEIRAAKFPTSSYSVSPPVDYQPWESTKATFVDTLEGVKEM
LEELKAAKEIAIDLEHHDVHSYQGLVSLMQISTRDKDWVVDTLKPWREELQVLNEVFTDP
NILKVLHGSSMDIIWLQRDLGLYVVGMFDTYHAACALNYPKRSLKFLLQKFVNFEADKRY
QMADWRIRPIPEGMFDYARSDTHYLLHIYDHIRNELVENSLPDNNLIDYVLEQSKKEALQ
VYERPVYDAATGQGPGGWYDLLSRNSVVVNREQFAVFKAVHQWRDEVAREEDEGVQCVFP
KHVLFRVAHTMPLDLGTLFRTLSPVTPIVQNRAVDLLEVIKKAKDEGADGPEWRDVYVKP
TRGTPAAPATQPVDVPSPTPADEANLPTVSRYEVSQFWGSVLESQEPPTVPAYSAVASAE
ALRLSLPLPPMPKTVSEAREKLAPAQPQTPKPATSAPAVKEEKKEDENKYFTVKEMGGPR
KRKAAPAETAEQLQSASSDFDTTDASSSLDTEDKPSKKQRRKEKKNKPAAQPETAAEEDG
EEEEEEAPFNYESAASVFNANPKATSGLPSRRRYNPYAKVLDAPSGVRKQKRETAGKAFT
FR
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggattccacagcggattttggctcgttacagcaacgggtgcagtcgtccctgatgcag
gtgacgcgcactgccggtcaactttcagccgaagatctcgatttccatcgcacctctaac
gcagaggtttctgattccctggacgagcagagcaaccgactcttgtcgctcacttcttct
attttgaaagccgccaccgccggaaccgatgtttctgcaccgaccttagacgacgaagat
tccctcgaagataattggcgcggcgtcgtggatgtcatcgatgcgctattggaaaaggcc
gacgcatgcttggatgaattcaccggtgttattaagaaattgagcccgtcgcaacaggat
caagctgccgctgccgctgcgaaggcttcgaagaagcaacccgctaaattcccgaccatt
tacgactacggcccgtcgaagatcccgaagccgcaattgctgttcgaacgcaaggccgat
aacaccgataccgcgcctttcaagcctttgcttaagacgaagcctcatgccgttgttccg
ctgaaagactcgttaaagttgtccgattccgctgtcggatatgtcaacccgtacgagaag
gagattcgtgccgcaaagttccccacttcttcctacagcgtgtcgccgcctgtggattat
cagccgtgggagtcgacaaaggcgacttttgtggatactctggagggagtgaaggagatg
ttggaggaacttaaggccgcgaaggagatcgcgattgatttggagcatcacgatgtgcac
tcgtatcagggtcttgtctccttgatgcagatcagcactcgggataaggattgggttgtt
gatacgcttaagccgtggagggaggagctgcaagttcttaacgaagtgttcacggatccc
aacatcttgaaggtgcttcacggttcctcgatggatattatctggcttcagcgcgacttg
gggctgtacgtcgttggcatgttcgatacataccatgctgcttgcgcgttgaactacccc
aagcgcagtttgaagttcctgctgcagaagtttgtcaacttcgaagccgataaacgttac
cagatggccgactggcgcattcgaccgatcccggaaggcatgttcgattacgctcgttcg
gatactcactaccttcttcacatctacgaccacattcgcaacgaacttgtcgaaaactcc
ctccccgacaacaaccttatcgactacgtcctggagcagtctaagaaggaagctctgcaa
gtatatgagcgtcctgtttacgatgctgctactggtcaaggaccgggtggttggtacgac
ctcctttctcgcaattcggtcgtggtcaacagggaacagtttgccgtattcaaagcagta
catcagtggcgtgacgaggttgctagagaggaagacgagggcgtgcaatgcgtgttcccg
aaacacgttctcttcagggttgctcacactatgccgctcgacttgggcaccctgttccgg
acattgtcacctgtgacaccaattgtccaaaaccgcgctgtagaccttttggaagtcatc
aagaaggctaaggatgagggcgctgatggccctgaatggcgtgacgtctacgtcaagcca
accaggggtacaccggccgcgccggcgacacagccagtcgatgtcccgtccccgacccca
gcagacgaggccaatctccccactgtttctcgctacgaggtctcccaattctggggttcc
gtgttggagtcacaagaacctcccacggtccctgcatactccgccgttgcttcagccgaa
gctctccgtctctccctcccccttccgcctatgcctaaaaccgtctccgaagcccgcgaa
aagctcgcacccgctcaacctcaaaccccgaaacccgctacctctgcacccgccgttaag
gaagagaagaaagaggacgagaacaagtacttcaccgtcaaggaaatgggtggaccacgt
aagcgcaaggccgcccccgcagagacggccgagcaattgcagtccgcctcatcggatttc
gacaccactgacgccagttcctcgttggacactgaagataagccatccaagaaacagcgc
cgcaaggagaagaagaacaagcccgcagcacaacccgagacagctgccgaggaggacgga
gaagaggaggaagaggaggctcccttcaactacgagtccgctgcctctgtattcaatgcc
aaccccaaggctacttcgggactcccgtccaggcgtcgttataatccctatgctaaggtg
ctcgatgccccgtcgggagtgcggaagcagaaacgcgagactgccggaaaggcgtttacg
ttccggtga
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