Aspergillus niger (black aspergilli): An18g02480
Help
Entry
An18g02480 CDS
T01030
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
ang
Aspergillus niger (black aspergilli)
Pathway
ang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
An18g02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ang03019
]
An18g02480
03041 Spliceosome [BR:
ang03041
]
An18g02480
Messenger RNA biogenesis [BR:
ang03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
An18g02480
Spliceosome [BR:
ang03041
]
Complex B
Other components
Prp19-related factors
An18g02480
Complex C
An18g02480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_8
SNAP
DEP
TPR_17
ARM_TT21
Motif
Other DBs
NCBI-GeneID:
4989809
NCBI-ProteinID:
XP_059602898
UniProt:
A0AAJ8E0H4
LinkDB
All DBs
Position
VIII
AA seq
822 aa
AA seq
DB search
MRANGFTRRLWSVRVENYRDLTSCGRWYGLFSACGTPHITIFRVTWWCQNTADHRQYLEF
RTHHLKGRNATVYRAEYQKVNALFERALILLNKMPRIWEMYLSFLLQQPLVTQTRRTFDR
ALRALPITQHNRIWKLYKTFARSASGQTAVKIWARYMQIHPENAEEYIQLLVDMGQYTEA
VKRYMEILDNPRFQSKEGKSNFQLWTEMVDLLVSKAKQIETGPQVGIDVDAILRSGIDRF
ADQRGKLWAGLATYWITRGNFEKARDVFEEGITTVMTVRDFTLIFDSYVEFEESIIGSLM
ESAATRTDKGQSDEEADFDLDLRMMRFEQLMDRRPFLVNDVLLRQNPNNVIEWEKRVALW
GDNKHEVVQTYTAAIAAINPKKAHGKFSELWVNYAKFYENGGDLDTARVIFEKAVKVPFK
SVAELAETWCEWAEMELRSENFDKAVEIMAKATQAPKKSTVDYFDENLSPQQRVHKSWKL
WSFYVDLVESVSSLEETKKVYERIFELRIATPQTVVNYANLLEENKYFEDSFKVYERGLD
LFSYPVAFELWNLYLTKAVDRKIGIERLRDLFEQALDGCPPKFAKPLYLMYGNLEEERGL
ARHAMRIYERATRAVSDEDRFEMFEFYITKSASNFGLTSTRPIYERAIAALPDQEAKEMC
LKFAEMERRLGEIDRARAIYGHASQFCDPRTNAPFWQKWEAFEVQHGNEDTFKEMLRIKR
SVQAQYNTDVNFIASQAIARSQQRTQDGGKDNTEQDGVDAEAERADAMAALERQARAPVG
FVAASTGPEGGNRPPPAGQEQQPPAAPVNPDAIDLDDDMDAD
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgctaatggatttactcgcaggttatggagcgtgcgtgtagagaactaccgagat
cttacaagctgtggaagatggtatggactcttttctgcctgcggcacccctcatatcact
atattccgtgtcacatggtggtgtcagaatacagctgaccataggcagtatctcgaattt
cggacacaccaccttaagggccgcaacgcgactgtttatcgggccgaataccagaaagtc
aacgcgcttttcgagcgtgctctcatcctgctcaacaagatgccgcggatatgggaaatg
tatctctccttcctgctccagcagcctcttgtcacgcaaaccagacggacgttcgatcgt
gccctgcgagctctgccaatcacacaacacaatcggatttggaagctctacaagactttt
gcgcgttccgcgtcagggcagacggccgtgaagatctgggctcgatacatgcagattcac
cctgaaaatgccgaggagtacattcaactgctcgtcgatatgggccagtacacggaggct
gtgaagcggtacatggaaatactcgacaacccccgtttccagtccaaggaaggaaagagt
aatttccagctatggacggagatggtggacttgctggtatcaaaggcaaagcagatcgag
actggccctcaggtaggaattgatgtcgacgccattctgcgcagtggcattgatcggttt
gccgaccagaggggcaagctgtgggctggtttggccacttattggattaccagaggtaat
ttcgaaaaagcaagagatgtcttcgaggaaggtatcaccacggtcatgacggtcagagac
tttacactgatctttgactcttatgtcgaattcgaggagtctatcattggcagcctgatg
gaatcagcagcaacccgaactgacaaaggacaaagtgacgaggaagcagacttcgacctt
gatctgcggatgatgcgatttgagcaactcatggatcgacgaccgttccttgttaatgat
gtgcttctcaggcagaacccgaacaatgtcattgagtgggagaagcgagtggccctctgg
ggagacaacaagcacgaggtcgtgcaaacctacacagctgctattgcggctattaacccc
aagaaggcacacggcaaattctccgaactctgggtcaactatgccaagttctacgaaaac
ggaggcgatctggacacggctagagtcatctttgagaaggctgtcaaggttcctttcaaa
tcagttgctgaactcgccgagacatggtgcgagtgggcggaaatggaactgcggagcgag
aacttcgacaaggccgtggagatcatggcgaaggcaacgcaagcaccgaagaagtcgact
gtggactatttcgacgagaacctgtcacctcagcaacgtgtgcacaagagctggaagtta
tggagtttctatgtcgatttggtcgaaagtgtctcctccctggaggagacgaagaaggtc
tacgaaaggattttcgaactacgcatcgctacccctcaaaccgtcgtcaactacgccaac
ctcctggaagagaacaaatacttcgaagactccttcaaggtctacgaacgtggattggat
ctcttcagttacccagttgcgttcgagctctggaacctctacctgaccaaggcagttgac
cggaaaattggaattgaacgactccgcgatctgttcgaacaagccttggacggatgtcct
cccaaattcgccaagcctctttacttgatgtatggcaacctggaagaggagcgcggtctg
gccagacatgccatgagaatatacgagcgtgctacccgcgccgtctccgacgaggacaga
ttcgaaatgttcgagttctacatcaccaagtcggcttcgaacttcggattaacgtccacg
agacccatctacgaacgggccattgcagccttgcccgaccaagaagcgaaggaaatgtgc
ctcaagtttgcggagatggagcggagactcggtgaaatcgatcgggcccgtgctatctat
gggcatgcgtcgcagttctgcgatccccggaccaacgcgcccttctggcagaaatgggag
gcatttgaagtccagcacggaaacgaggacaccttcaaggagatgcttcgtatcaagcgc
agtgttcaagcacagtacaacaccgacgtcaactttatcgcttcccaggcgattgcccgc
agtcaacagcggacccaagatggcggcaaagacaacactgagcaagacggcgtggacgcg
gaggcggagcgtgcagacgcaatggcagcattggagcgacaggctcgtgcccccgtgggc
tttgtcgccgccagcaccggaccagaaggtggcaaccggccacctccagctggccaggaa
cagcagcccccggctgctccagtcaacccggatgcgattgacctcgatgacgacatggat
gctgactag
DBGET
integrated database retrieval system
