Paraurantiacibacter namhicola: A6F65_00888
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Entry
A6F65_00888 CDS
T04447
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
anh
Paraurantiacibacter namhicola
Pathway
anh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A6F65_00888 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anh03019
]
A6F65_00888 (deaD)
03009 Ribosome biogenesis [BR:
anh03009
]
A6F65_00888 (deaD)
Enzymes [BR:
anh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A6F65_00888 (deaD)
Messenger RNA biogenesis [BR:
anh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A6F65_00888 (deaD)
Ribosome biogenesis [BR:
anh03009
]
Prokaryotic type
rRNA helicases
A6F65_00888 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANU07199
UniProt:
A0A1C7D6V3
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All DBs
Position
914460..916235
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AA seq
591 aa
AA seq
DB search
MPFPNAHPALAAALSERGFETPTAVQAAVAGEEAAGRDLVVSAQTGSGKTVAFGLSFAPQ
VLGDEEQAGFAEAPRALVIAPTRELALQVSRELAWLYAKAGARIATCVGGMNPSQERRVL
KSGAHIVVGTPGRLRDHLERGALDLSGLQAVVLDEADEMLDMGFREELEEILDASPDERR
TLLFSATMPRPIENMARRYQRDALRIATREDARGHNDIAYQAVTVSPSEVENAVVNLLRF
HEAETAILFCATRDNVRHLHATLQERGFGVVALSGEHSQQERNQALQALRDKRARVCVAT
DVAARGIDLPSLSLVVHVEIPRDAETLQHRSGRTGRAGRKGTAVIVVPFPRRKRVESMLR
KARIEAEWISAPDREAILARDHDRLLERLLEPIETGKADKALAKRVMDELSLEDIALRLV
KAHRATMPAPEELLVNTPEAHRAAQKERHRPGFEDTIWFRMDVGRRQNADARWILPLLCR
RGHITRNEVGAIRIGPQETHFQIPRAIADKFAEAAERTAQSGEDGSDIAIVRSEEPPRDA
AKRHRKGGAGHGGASGKPRVSPRHGGGKGAGRPPFKGKGKPSKGKPGKRPD
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcccttccccaatgcccatcccgctcttgcagcggccctatcggaacgcggtttcgaa
actcccactgccgtgcaggcagctgtcgcaggcgaggaagctgccggccgcgacctggtg
gtgtctgcgcagacgggatcggggaagaccgtggcctttggcctgtcctttgccccgcag
gtgcttggcgatgaagagcaggccgggtttgctgaggcgccgcgcgctctggtgatcgcg
ccgacgcgcgagctggccctgcaggtcagccgcgaactggcctggctctacgccaaggca
ggtgcgcgtatcgccacctgcgttggcggtatgaacccatcgcaggaacgccgcgtgctg
aagtccggcgcgcatatcgttgtggggacgcctggccgcctgcgtgatcacctcgaacgc
ggcgcgctagacctcagcggcctgcaggccgtcgtgctcgacgaggcggatgagatgctc
gacatggggtttcgcgaggagctcgaagagattctcgatgcaagcccggatgagcgccgc
accctgctgttctccgcgaccatgccgcgcccgatcgagaacatggcacgccgctaccaa
cgcgatgccttgcgcatcgcgacgcgcgaggatgcgcgcggccataacgatattgcctac
caggccgtcaccgtctcgccttccgaggtcgagaacgcggtcgtgaacctgctgcgcttc
cacgaggccgaaacggccattctgttctgtgccacgcgcgacaatgtccggcacctccat
gccaccttgcaggaacgtgggttcggagtggttgccctgtcgggcgagcattcccagcag
gaacgcaaccaggccctgcaggcgctgcgcgacaagcgtgcgcgcgtctgcgtggcgacc
gacgtcgcggcgcgcggcatcgacctgcccagcctgagcctggtcgtgcatgtcgaaatt
ccgcgtgatgccgagacgttgcagcaccgctctggccggacaggccgcgccgggcgcaag
gggaccgccgtcatcgttgtgccgttcccgcgccgcaagcgtgtcgaaagcatgctgcgc
aaggcccggatcgaagccgagtggatctccgcgcccgaccgcgaggccatcctggcacgc
gaccacgaccggctgctggagcgcctgctcgagccgatcgagaccggcaaggcggacaag
gcgctggccaagcgcgtgatggacgaattgtcgctggaagatatcgcgctgcgcctcgtg
aaggctcaccgcgcaacgatgcccgcgcccgaggaactgctggtcaacacgccggaagcg
catcgcgcggcacagaaggaacggcatcgccccggcttcgaggataccatctggtttcgc
atggatgtcggccgccggcagaatgcggacgcgcgctggatcctgccgctgctgtgtcgc
cgcgggcatatcacccgcaacgaggtcggagcgatccgtatcggaccgcaggaaacccat
ttccagatcccccgtgccattgcggacaagtttgccgaagctgccgagcgcaccgcgcag
agcggcgaggacggcagcgatattgctatcgtccggtccgaagagccgccccgcgacgcg
gcaaagcgccatcgcaagggcggggccgggcatggcggagcttcgggcaagccgcgcgtg
tccccgcgacatggcggcggcaagggcgccggaaggccgcctttcaagggcaagggcaag
ccgtccaagggcaagccgggcaagcgcccggactga
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