Paraurantiacibacter namhicola: A6F65_01943
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Entry
A6F65_01943 CDS
T04447
Symbol
rnd_2
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
anh
Paraurantiacibacter namhicola
Brite
KEGG Orthology (KO) [BR:
anh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anh03016
]
A6F65_01943 (rnd_2)
Enzymes [BR:
anh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A6F65_01943 (rnd_2)
Transfer RNA biogenesis [BR:
anh03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A6F65_01943 (rnd_2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
ANU08235
UniProt:
A0A1C7D9X8
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All DBs
Position
1961472..1962719
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AA seq
415 aa
AA seq
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MKIHPLITDSDTLADFCEKMAESEFVCVDTEFMRENTYYPLLCLVQLGNEEEAAAIDPLA
DGIDLSPLWDLLCDNEEVLKIFHAGGQDVEIVYNFTGKTPHPIFDTQIAMMAISQSEQIG
YANLVESWLGKTIDKGARFTDWSRRPLTERQIEYAIGDVTYLAQIFPRMLKKLIKTGRGA
WLNAEMEKLADPSNYNADPEKLWRKIRAPSRNAMVLGRLKALAAWREGEAQDKDIPRGRI
MRDETLADIASHPPKKQADLGKVRGLSNAWKDNDIGRRLMKVLEGAEELPKSEMPAKPKR
GAPLGKEGALVADLLKLLLKIRSREIEIASRLLTRSDELEALAAGVRDLPVLEGWRYEVF
GKEAVELVEGKLAFAVEGGRLKMAPIADIAKGPEEPAESTEPDPEPETDPETAQE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaagatacacccgctgattaccgatagcgatacgctggccgacttctgcgaaaagatg
gcggaaagcgaattcgtgtgcgtcgacaccgaattcatgcgcgagaatacctattacccg
ctgctctgcctggtgcaacttggcaatgaggaggaagccgccgccatcgacccgctggca
gacggcatcgacctctccccgctgtgggacctgctgtgcgacaatgaggaggtcctgaag
atcttccacgccggcggtcaggacgtggagatcgtctacaacttcaccggcaagacgccg
catcccatcttcgacacgcaaattgcgatgatggccatcagccagtccgagcagatcggc
tatgccaacctcgtcgaaagctggctgggcaagacgatcgacaagggcgcgcgctttacc
gactggagccgccgcccgctgaccgaacggcagatcgaatatgccatcggcgatgtgacg
tacctcgcccagatattcccgcgcatgctgaaaaagctgatcaagaccggccgcggtgcc
tggctgaatgcggagatggaaaagctggccgacccgtccaattacaacgccgatcccgaa
aagctgtggcgcaagatccgcgcaccgtcgcgcaacgccatggtgctgggccggctgaag
gcgctggccgcatggcgcgaaggcgaagcgcaggacaaggacattcctcgcggccgtatc
atgcgcgacgagacgctggccgacatcgccagccatccgcccaagaaacaggcggacctc
ggcaaggtgcgcggcctttccaacgcctggaaggacaatgacatcggtcgccgcctgatg
aaggtgctggaaggcgcggaggaattgcccaagtccgaaatgccggccaagcccaagcgc
ggcgcgccgctgggcaaggaaggcgcgctggtggcggacctgctgaagctgttgcttaag
atccgcagccgcgaaatcgagatcgccagccgcctgctgacccggtccgacgagctggag
gcgcttgccgccggcgtgcgcgacctgcccgttctggaaggctggcgttacgaggtgttc
ggcaaggaagcggtcgagctggtggagggaaagctggcctttgccgtcgagggtggcagg
ctgaagatggcccccattgccgacattgcgaaaggccccgaagagcccgccgaatccacc
gagcctgacccggagcccgagaccgaccccgagaccgcgcaggagtga
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