KEGG   Aspergillus nidulans: ANIA_00065
Entry
ANIA_00065        CDS       T01016                                 
Name
(RefSeq) WD-repeat containing protein SWD2
  KO
K14962  COMPASS component SWD2
Organism
ani  Aspergillus nidulans
Pathway
ani03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ani00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    ANIA_00065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ani03019]
    ANIA_00065
   03036 Chromosome and associated proteins [BR:ani03036]
    ANIA_00065
Messenger RNA biogenesis [BR:ani03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     ANIA_00065
Chromosome and associated proteins [BR:ani03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     ANIA_00065
    COMPASS/SET1 complex (yeast)
     ANIA_00065
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_EML Beta-prop_EIPR1 Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st Beta-prop_NUP159_NUP214 Beta-prop_TEP1_C Beta-prop_RIG_2nd Mala_s_1-like Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_SCAP WDCP
Other DBs
NCBI-GeneID: 2875841
NCBI-ProteinID: XP_657669
UniProt: Q5BHB5
LinkDB
Position
VIII:4655464..4656657
AA seq 364 aa
MADGGQSTPQQVPQQAAQQTQKVSDVIRSYRSTKVFKSTKQDSFVTSLDFDDQGEFVVSC
GDDEIIQIFDVKAGKMTKSIPSKKYGAHLARFTHHSRQVLHASTKVDDSLRLLDLHSESY
IRYFSGHTDKVTCLALSPGSDSVISCSKDDTVSIWDLGSRYAQGKLKLSTPYLVAFDPSA
SVIAIASQSTSSILLYDFRNYDKSPFSTFDLAKYEERYTPSTRGRAWTRLEFSNDGKYLL
VGTDYHGHFVLDAFEGELKAFLVGKNGSPGRAAPVSTTGKPLGQGDACFTPDGRYVIGGS
GDHHDLLVWDLQQTPDTNLCLQAMAKLPHRGKTAIVEYNPRFNMIASADKEVYFWLPEDT
SKAV
NT seq 1095 nt   +upstreamnt  +downstreamnt
atggcggacggtggtcagtcaacaccacagcaggttccgcaacaagctgcccagcagaca
cagaaggtgtcggatgttatccgtagttatcggtccacaaaggtgttcaaatcgaccaag
caagacagctttgtaacgtctcttgatttcgacgaccaaggagagttcgtcgtctcttgc
ggcgacgatgagattatccaaatattcgacgtcaaggccggtaaaatgacgaagtctatc
cctagcaagaagtatggcgcacatctggctaggttcacccatcattctcgccaggtcctc
cacgcaagtaccaaagtcgatgattctctacgtttgcttgatttacacagcgaatcatat
atacgctacttctcgggtcataccgataaagtgacgtgtttggctctatcgcccggaagc
gactcggtgatctcatgctccaaggatgatacggtttccatctgggatttgggctctaga
tacgcgcaagggaaactaaagctctcaactccatacctcgtggcttttgatccgagcgca
tcggtcattgcaattgcctcccaatcgacatcatctatcctcctctatgacttccgcaat
tacgacaaatctcccttttcgacctttgatcttgctaagtacgaggagagatatacgcct
tcgacgcgcggcagagcatggactcgccttgagttctcaaacgacggaaaatacctactt
gtcgggaccgattaccatggtcatttcgtcctcgacgccttcgagggcgagctcaaggct
tttctggttggaaagaatggttcaccgggcagagctgcaccggtttcaactaccggaaag
cctctcggtcaaggagatgcttgcttcacaccagatggcagatacgttattggagggtca
ggtgaccatcatgacttactcgtatgggatctgcagcagaccccagatacaaatctctgc
ttgcaggcaatggctaagttaccacatcgaggtaaaaccgccatagtcgagtacaatcca
aggtttaatatgatcgcttcggcggacaaggaagtctacttctggctaccggaagacact
tcaaaggccgtctaa

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