Aspergillus nidulans: ANIA_00138
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Entry
ANIA_00138 CDS
T01016
Name
(RefSeq) TFIIH/NER complex subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ani
Aspergillus nidulans
Pathway
ani03022
Basal transcription factors
ani03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ani00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ANIA_00138
09124 Replication and repair
03420 Nucleotide excision repair
ANIA_00138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ani03021
]
ANIA_00138
03400 DNA repair and recombination proteins [BR:
ani03400
]
ANIA_00138
Transcription machinery [BR:
ani03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ANIA_00138
DNA repair and recombination proteins [BR:
ani03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ANIA_00138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
DUF2545
Cytomega_UL20A
Motif
Other DBs
NCBI-GeneID:
2875918
NCBI-ProteinID:
XP_050469322
UniProt:
C8VQI5
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All DBs
Position
VIII:complement(4422858..4424099)
Genome browser
AA seq
392 aa
AA seq
DB search
MNAVDATEHYGTSAHDPAPSLLTVIIDTNPHAWALLEQNEKNQLPFSTALANILVFLNAH
LACNYANEVAVVASHTHKAAWLYPSPNSPTTSADSDGDVTMSNNNHMSTGGGSGKPSQVN
KYRPFRIVEEQVTSNLRHLVDSTNRDDLDSGASTMMAGALTLALSHINRRTIAWAEAHGG
GDASSFSRSGDPDTSTTSMIARRSTTTTATNDGAAEGLQSRILIISVSSATGSAHQYIPI
MNGIFACQRLHIPIDVCKLSGDAVFLQQASDATKGIYMSLSEPRGLLQYLMMAFLPDQRS
RKHLILPTRVDVDFRAACFCHRRVVDIGFVCSICLSIFCEPPENGDCLTCGTHLDTGDYG
AKPAVVVRKKKKKKIRPNGVSATPTPTPTPGP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtagatgcgaccgagcactatgggacgagtgcgcatgaccctgcaccgtcc
ctactaacagtcatcattgacacaaatcctcatgcttgggcgttacttgagcaaaatgag
aagaatcagcttcccttctcaaccgcgctcgccaacattctcgtcttcctcaacgcccat
ctcgcctgtaactacgcaaacgaagtcgccgttgtcgcctcccacactcacaaagccgca
tggctctatccgtccccaaactcaccaacgacatccgcagactcagacggcgacgttaca
atgagcaataataaccatatgagcaccggtggtggtagcggtaaacccagccaagtaaac
aaataccgcccgtttcgaatcgtcgaggagcaagtgacatccaatctccgacacctggta
gactccaccaaccgtgatgacctagacagtggcgcctcaacaatgatggccggcgcactt
actttagctcttagccacatcaaccgtcgcacaattgcctgggctgaagctcacggaggc
ggcgatgcctcctccttctcgcgctctggtgacccagatacaagcacaacgtccatgata
gcccgacgctccacaaccacaacggcgacaaacgacggtgccgccgagggtctacagtct
cgtatcctcatcatctccgtcagtagcgcgaccggctccgcgcaccaatacatcccaatc
atgaacggcatcttcgcctgccaacgcctgcacatccccatcgatgtctgcaaactcagt
ggcgacgccgtcttcctacaacaagcctccgatgcaacaaagggaatctacatgtccctt
tccgaaccccgcggtttactgcagtatctaatgatggcattcctcccggaccaacggtct
cgcaaacacctaatccttccgacacgagtagatgtagacttccgcgccgcgtgtttttgc
catagacgcgttgtggatataggattcgtttgctcgatctgcctgagtatcttctgtgaa
ccaccggagaacggcgattgcttgacttgcggcacgcatctggatacgggtgactacggc
gcgaagccggcggttgtggtaaggaaaaagaagaagaagaagattagaccaaatggggtc
tctgctacgcctacgccgacaccgacgccggggccttga
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