Aspergillus nidulans: ANIA_00298
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Entry
ANIA_00298 CDS
T01016
Name
(RefSeq) cleavage polyadenylation factor RNA-binding subunit YTH1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ani
Aspergillus nidulans
Pathway
ani03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ani00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ANIA_00298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ani03021
]
ANIA_00298
03019 Messenger RNA biogenesis [BR:
ani03019
]
ANIA_00298
Transcription machinery [BR:
ani03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
ANIA_00298
Messenger RNA biogenesis [BR:
ani03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
ANIA_00298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
zf-CCCH_DUS3L
zf-CCCH_11
zf-CCCH_9
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
2876077
NCBI-ProteinID:
XP_657902
UniProt:
Q5BGN2
LinkDB
All DBs
Position
VIII:<3927829..>3928593
Genome browser
AA seq
254 aa
AA seq
DB search
MAVDVGHVASQLVSTDRTREPGFDRFSFVPFLRKSYGFGLVTDVPVCKAYSEGHCPLGPA
CPDRHPTPSRVTTSTTTASGLAPSTTHGSLVCKHFLKGLCKKGMKCEYLHEYNLRRMPEC
QSFSRSGYCPNGDDCLYQHVREQARLPPCEHYDQGFCPLGPLCAKRHVRRRLCPYYVAGF
CPEGPNCANAHPRWSENLPKPTIRVEKTEEELEHERNLIREEQEREREREREWRNERGRG
GFGMRGRYRGRGRG
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggctgtcgacgttggtcatgttgcgtcccagcttgtgtctacggatcgcactcgagaa
ccgggtttcgatcgattctccttcgtccctttcctacgaaagagctatggcttcggcctc
gtcaccgacgttcccgtatgcaaagcctacagcgaaggccactgcccattgggccctgct
tgtccagaccgacatccgacaccgtcgcgagtaaccacatccacgaccacggcctccggt
ttggcgccttcaaccacacatgggtcacttgtctgcaagcacttcctcaaaggcctctgc
aaaaagggcatgaagtgtgaatatctccacgaatacaatctccggcgcatgccagaatgc
caatccttctcccggtctgggtattgtcctaatggggacgactgcctgtaccagcatgtc
cgggagcaggcgcgccttcctccgtgcgagcattacgaccagggattctgtccactgggc
ccgttgtgcgcgaaacggcatgttcgtcgtcgcctctgcccatactatgttgctggattt
tgtcctgaagggccaaactgtgcgaacgcccatcctcggtggtcggagaatctacccaag
ccaacaatacgagtagagaagacggaagaagaattggagcatgaaagaaacctgatccgc
gaagagcaggagagggaacgggaaagagagcgtgaatggaggaacgaacgtggacgcgga
ggctttgggatgcgcggccgatatcgcggcagaggacgaggctaa
DBGET
integrated database retrieval system
