Aspergillus nidulans: ANIA_00809
Help
Entry
ANIA_00809 CDS
T01016
Name
(RefSeq) DNA-directed RNA polymerase II core subunit RPO21
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
ani
Aspergillus nidulans
Pathway
ani03020
RNA polymerase
ani03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ani00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ANIA_00809
09124 Replication and repair
03420 Nucleotide excision repair
ANIA_00809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ani03021
]
ANIA_00809
03400 DNA repair and recombination proteins [BR:
ani03400
]
ANIA_00809
Enzymes [BR:
ani01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ANIA_00809
Transcription machinery [BR:
ani03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
ANIA_00809
DNA repair and recombination proteins [BR:
ani03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
ANIA_00809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
2876587
NCBI-ProteinID:
XP_658413
UniProt:
Q5BF71
LinkDB
All DBs
Position
VIII:complement(2359970..2365454)
Genome browser
AA seq
1745 aa
AA seq
DB search
MSNVYFPYSKAPLRTIAEIQFGLFSPEEIKRMSVVHVEYPETMDDQRQRPRTKGLNDPRL
GTIDRQWNCETCEEGQKECPGHFGHIELATPVFHIGFLTKIKKLLETVCHNCGKIKANTS
DPKFLDALRIRDPKRRFDHIWRLSKDILICEADPPPEDDEYGKESSKPVRLHGGCGNAQP
TVRKEGITLVGTWKPSKSMMDEMDMQQPEKKIITPQMALNIFRNISHEDVRIMGLSNDYA
RPEWMILTVLPVPPPPVRPSVVVGGSTSGQRGEDDLTYKLAEIVRANQNVQRCEQEGAPE
HVVREFESLLQYHIATYMDNDIAGQPKAMQKSNRPVKAIRSRLKGKEGRLRQNLMGKRVD
FSARTVITGDPNLSLDEVGVPKSIARTLTYPEVVTPYNIEKLQQLVMNGPNEHPGARYIV
RDNGERIDLRHAKRAGGQQLLYGWKVERHLMDGDVILFNRQPSLHKESMMGHRVRVMPYS
TFRLNLSVTSPYNADFDGDEMNLHVPQSEESRAELQQLALVPQNIVSPQRNGPLMGIVQD
TLCGIYKICRRDVFLTKEQVMNIMMWVPDWDGVIPPPAIFKPRPRWTGKQMISMVFPSGL
NLMRTDSKGAAPSSEKYSPLQDGNVLIHEGQLMYGMLNKKIVGASGGGVIHIIFNEYGAD
AAVAFFNGAQAIVNYWLLHNGFSIGIGDTIPNDQTIQAIEECVRKRKLEVEEITATATQN
KLEPLPGMNVRETFESKVSVALNTARDEAGTATEKSLKDLNNAVQMSRSGSKGSIINISQ
MTAVVGQQMVEGKRIAFGFKYRTLPHFTKDDYSPESRGFVENSYLRGLTPTEFFFHAMAG
REGLIDTAVKTAETGYIQRKLVKALEEVMVKYDGTVRNSLGDIIQFIYGEDGLDGAHIEH
QKVDILTCSDEKFKERFRIDLMDPALSLGPDVLEQANEIAGDVEVQRYLDQEWEELLKAR
EVVRHVAKGTEDSMPLPINIQRILEMARTTFRIREGTMSDLHPAEVIPQVQSLLDRLVIV
RGDDPISKEAQESATMLFKAQLRSRLAFKRLVTQYSMNKLAFQHVLGAIESRFAKAAAAP
GEMVGVLAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEILNVATNIKTPSMTVYQ
EPERAHDKEGAKQLRSAVEYTNLRSITEATEIYYDPDIQTTVIENDRDMVESYFIIPEDV
NDDSSRQSKWLLRIILSRAKLLDKGLTVQDVATKIKQAYPRDIAVIFSDNNADEQVIRIR
QIQDYKEDEDDDDIEYDVTLKKLEQHLLDTLNLRGVPGVERAFINEKKKIRVQEDGALTD
EQSDPLCREWILETSGSSLAEVLAIPGVDATRTYSNQFIEVFEVFGIEAARAAVLREFTV
VLSFDGSYVNHRHLALLVDVMTMRGYLTPVTRHGINRADNGALMRCSFEETVEILLEAAA
FGELDDCRGVSENLILGQMAPAGTGEFDIYLDQNMLNTVVSNNARYGVMGALGAKDAIIS
DGAATQYDTGSPMQESAYIGTPDPDSNFSPIRQAGAETPGGFTEYQPSGGFGGFSPAATS
PAGYSPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYS
PTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGG
ARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSP
TSPRQ
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacgtctactttccctattccaaggctccgcttaggaccatagccgagattcag
ttcggcttgttcagtcctgaagaaatcaagcggatgagtgtggtccatgtcgagtatcca
gagaccatggacgatcaaagacaacgcccacgtactaagggtctcaatgatccgcgtttg
gggactattgaccgacaatggaactgtgaaacttgtgaagaaggtcagaaggaatgccct
gggcatttcggacacatcgagcttgcgactccggtctttcatatcggattcttgacgaaa
atcaagaagttgcttgagacggtctgccacaactgtggaaagatcaaagccaacacgtct
gatccgaagttcttagatgccctgcggattcgggacccgaagcgccggtttgaccatatc
tggcgactctcgaaggatattctgatttgcgaggctgacccaccaccggaagacgacgag
tacgggaaagaaagttcgaagcctgtcagattgcacggcggatgcggcaatgcgcagccc
actgttcgaaaggaagggataacgcttgtgggaacgtggaagccatcgaagagcatgatg
gatgagatggacatgcaacaacccgagaagaagataatcactccgcaaatggcgctgaat
atcttccgcaacatctctcacgaggatgttcgcatcatgggcttgagtaacgactatgcg
cgtcccgagtggatgattctcaccgtcttgccggttccacctcctcccgttcgcccaagt
gtagttgttggaggtagcacttctggtcagcgtggtgaggacgatttgacctataaactg
gctgaaatcgtccgagcaaaccaaaatgtccagcgttgcgaacaagaaggcgcgcctgaa
cacgttgtgcgcgagtttgagtctttgctacagtaccacattgctacttacatggacaac
gatatcgctggtcagccaaaggctatgcagaagtcaaacagacctgtcaaagcgattcgg
agccgtctaaagggtaaggagggccgtttgcggcagaacttgatggggaagcgtgtagac
ttctctgctcgtactgtgattactggtgatccaaatctgtcgctcgatgaagtcggcgtt
ccgaagagtattgccagaacactgacctaccctgaagttgttactccttataacatcgag
aaactgcagcagctagtcatgaacggtccgaacgagcatcctggggcacgatacattgtc
cgagataatggcgagcgcatcgatcttcggcatgcaaagcgtgcaggcgggcaacaactc
ttgtacggctggaaagttgagcgtcatctcatggatggggacgtgattctgtttaaccga
cagccctcccttcacaaagaatctatgatgggacatcgtgttcgtgtcatgccttattca
actttcagactcaatctttctgtaaccagtccatacaacgctgattttgacggtgatgaa
atgaacttgcacgttccgcagagtgaagagtctcgagcggaacttcaacaactcgcactg
gtgccgcaaaacatcgtgtctcctcaacgaaatggaccccttatgggtattgtgcaggat
acgctttgcggtatctacaagatctgccgtcgcgatgtcttcctgaccaaagagcaagtg
atgaacatcatgatgtgggttcctgactgggatggcgttattccaccacctgcgattttc
aagcccagacccaggtggacaggaaaacagatgattagcatggtattcccgtcgggtctc
aatctcatgcgcactgattctaaaggcgcagctccttcttctgagaagtactctcctctc
caggatgggaacgtcctcattcatgaaggccagttgatgtatgggatgctcaacaaaaag
atcgttggtgcgagtggaggtggtgtcatccacatcatcttcaatgaatatggggcagat
gctgctgtggcattctttaatggcgcgcaggccattgttaactactggctgctacacaac
ggtttcagtatcggtattggtgatactatccccaacgaccagactattcaagccattgag
gagtgtgtgcgcaagcggaaactggaagttgaggagattactgccactgcgactcagaat
aagctcgaaccccttcccggtatgaacgtgcgtgaaacatttgagagtaaggtctctgtc
gctctcaacacggcgcgtgatgaagctggtactgccaccgagaagagtttgaaggatttg
aacaatgctgtccaaatgtcgcgatctggatctaagggttctatcattaacatctcgcaa
atgactgctgtcgtcggtcagcaaatggtcgaaggcaagcgtattgcttttggatttaaa
taccgcactcttcctcacttcacaaaagacgactactctccagaatccaggggctttgtg
gaaaattcataccttcgtggcttgactccgactgaatttttcttccacgctatggctggt
cgagaaggtctcatcgatactgctgtcaagactgctgaaactggttacatccagcgtaag
ctagttaaggctcttgaagaagttatggtcaaatatgacggcaccgtccgtaactctctg
ggagacatcattcagttcatttatggagaggacggtctcgatggcgcacatattgagcac
cagaaggttgatattcttacatgttccgatgagaagtttaaggagcggttccggattgac
ctcatggatcctgccctcagcctaggcccggatgtactggagcaggccaatgagattgct
ggagatgttgaagtccaaagatacctggaccaggagtgggaagagttgttgaaggctcga
gaagttgttcgccatgttgcgaagggcacggaagattcaatgccacttcctatcaacatt
cagcggattctagaaatggctcgaaccactttcagaattcgcgagggaacgatgagcgat
ttgcatccagcggaggttattccccaggtgcaatcgcttctcgataggcttgtgattgtg
cgtggtgatgatcccatctcaaaagaggcgcaggagagtgcgacaatgctattcaaggcg
caattacgcagtcgccttgcgttcaagagactggtaactcagtattctatgaacaaattg
gccttccaacacgttcttggtgccattgaatcgcgttttgctaaggcagccgccgctcct
ggtgagatggtaggcgttctagcagctcagtcaattggtgaaccggccactcagatgaca
ttgaacactttccatttcgccggtgtctcgtccaagaacgttacacttggtgtaccccgt
ctgaaggaaatcttaaacgttgcgacaaacatcaagactccctctatgacagtttaccaa
gagcctgagagggcccatgacaaggagggagctaagcagcttcgaagtgccgtcgaatac
acaaacctacgctccattacagaggccacggagatctactatgatccagacattcagacc
acggttattgagaacgatcgcgacatggtagagtcatatttcatcattccggaggatgtt
aacgacgactcttctcgtcagtccaagtggctgctccgtatcatattgagtcgtgccaag
cttcttgacaaaggactcactgtgcaggacgttgctactaagatcaagcaggcgtatccg
agggatattgctgtgatttttagtgataacaacgccgacgagcaggtcattcgtatccgc
cagatccaggactataaggaagatgaggatgacgatgatattgagtacgatgtcaccttg
aagaagcttgaacaacaccttctggacactctgaaccttcgcggtgttcctggtgttgaa
cgtgctttcatcaatgagaagaagaagatcagagtacaggaagacggggccttgacggat
gagcagtcagacccattgtgcagagagtggatccttgaaacaagcggctcatccctcgct
gaggttctggcaattccaggtgtcgatgccactcggacatactcaaaccagttcattgag
gttttcgaagtgttcggtattgaagctgcgcgggcagccgtccttcgcgagtttacggtg
gtgttgtccttcgacggatcctatgttaaccatcgtcatttggcgcttttggtggatgtg
atgactatgcgtggctatctgaccccggttactcgccatggaatcaaccgtgccgataat
ggtgcacttatgcgctgctcctttgaagagactgttgagatccttctggaagctgccgct
tttggcgaacttgacgattgccgcggtgtgtcagagaacctgattctgggacagatggct
cctgcgggcacaggggagttcgatatttaccttgaccagaatatgctgaacactgtcgta
tcgaacaacgctcgttatggagtgatgggagctttgggagcaaaagatgcgatcatatct
gatggcgccgcgacccagtatgacaccggatctcctatgcaagaaagtgcctacattgga
actcctgatcccgactcgaacttttctccaattcgccaggcgggcgccgaaacccccggt
gggttcaccgaataccagccttctggtggctttggtggattcagccctgcagccaccagc
ccagcaggttactcgcccagcagccccttcagtgccaaccctacatcgcctggctattcc
ccaacctccagctactcccccacctctcctggcatgggtatcacaagcccgcgcttcatg
acatccccgggtttctcccccgccagtccgtcatttgcgccgacatccccggcctactcg
cctacatcgccagcttatgggcaggcttcgccgacgtcgccatcatactctccaacctcg
cctgggttctcaccaacgtcgccgaactacagccctacatcgccaagcttcagtccaact
tcacctgcatttagcccaacgtcgccaagctatagtccgactagcccggctatcggtggt
gctcggcatttatctccaacttcgcctacttctccgaagtacacacctacgtctcccggg
tggtcacccacgagcccccagacgtactctcccacgtcacccaactttgccggctcgccg
acttcgcccggtggaccaacatcccctggttacagccctacgtcgccggcattcagcccc
acctctcctcgccagtaa
DBGET
integrated database retrieval system
