Aspergillus nidulans: ANIA_01158
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Entry
ANIA_01158 CDS
T01016
Name
(RefSeq) mRNA-binding translational repressor SSD1
KO
K18748
protein SSD1
Organism
ani
Aspergillus nidulans
Brite
KEGG Orthology (KO) [BR:
ani00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ani03019
]
ANIA_01158
Messenger RNA biogenesis [BR:
ani03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
ANIA_01158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Dis3l2_C_term
OB_Dis3
Rrp44_CSD1
CSD2
Motif
Other DBs
NCBI-GeneID:
2876936
NCBI-ProteinID:
XP_658762
UniProt:
Q5BE72
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All DBs
Position
VIII:complement(1290849..1295570)
Genome browser
AA seq
1374 aa
AA seq
DB search
MDQQNQSGVPGPAGRKLHIAHRRSPSELTPLMMEQLAIQQQIELLQQQQQQIAATHQQYI
NMGLLQPQQIGQASGFTPSLQGGGAPIGGVSPQQLGAFQFPQVGQQQQLGVPGNTSNQHS
HRRNQSALPGFGMGGPPPAPSSGASGYSDYSQQQQGNFQRNENGAHGRGRGGPSGGGHQR
RHSLALPEAKKAAELAQQKRAASGFQFPAPTGDSSEAAPASDDKPSTPNPTQSSQGLGLQ
RAGNIRASAHGRSQSMAVGGNRGSLSGRGPGGFQFPANDGSSGPENQRRGSQASHARTPS
RNFDGNWRQPNNQSQGQDQSKGLGQQNSGFQPGHRARASMNQSIGSIGSFQYPGQPQLIQ
LPQGQVVMAPPQMFGGAQQLNPLQLAQLQALQQSGQLNGQGLGGLQASQHAPQPLSAQQT
QQQQQQQRKTLFTPYLPQANLPALLSNGQLVSGVLRVNKKNRSDAYVTTPDLDADIFICG
SKDRNRALEGDFVAVELLDVDEVWSQKKEKEEKKKRKDITDARSASNAGTDKMSRSDSTG
DRQEVGPDGSIRRRGSLRQRPTQKKNDDVEVEGQSLLLVEEDEISDEQKPLYAGHVVAVI
ERIAGQMFSGTLGLLRPSSQATKEKQEAERLARDGAHGRHQDRQQDKPKIVWFKPTDKRV
PLIAIPTEQAPRDFVEKHQDYANRIFVACIKRWPITSLHPFGTLVEQLGEMGDLKVETEA
LLRDNNFGSDEFTDAVLKSIGWENWSISSEGDLSSRRDFRQETTFTIEPTGTSELDNAYH
FKALPDGKAEIGIHVTDIAHFVKPNSLVDREAKKRGTAVYLVDRLVKMLPPRIATELCAL
LPGEERLTVSVVFKANPETGAIDDDIWIGKSIIKSSGKLGFDEVESVIKGTSDVPLSGVS
VDIIRGLQRTASKFREARLGNRVSQIPPLRLLHSLDDENVPVESNIFGSSAVRELVEELS
CKANFLVARKLVAALPDKAFLRRQQSPNPRRLHSFVDRMNRLGFGFDESSSGSLQSSLCK
VKDDDLRKGMETIFVKSMQRAKYYVAGTVQDEMRPHYTLNLPVYTHFTNPLRRYADVIVH
RQLEAVLSDGAIEFSDDVESLSKTADICNNKKDSAHNAQEQSVHIEACRNMDKLRQEIGG
DLISEGIVLCVYESAFDVLIPEYGFEKRVHCDQLPLKKAEYRKETRVLELYWEKGVPSSA
YIPEDERPKPANSRAAQAAAAAREAEAARERAREREEALRRQTETGTMSADDVDALFDDD
DDVSEVTEMAAGVSLNSADRSTQSMPPSPTRNGHMPQAPQRTLSDPKIATNTVDAPETKL
TNKEKYLSLFKLREEGGEYIQDVTEMTRVPIILKTDLSKSPPCLTIRSVNPYAL
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggatcaacagaatcagtccggggtccccggacctgctggacgaaagcttcatattgcc
catagacggagcccatctgagcttacccctctcatgatggaacaactggcgatccagcag
caaattgagttgcttcaacagcaacaacagcaaattgcagctacacaccagcagtatatc
aatatgggtttattgcaaccgcagcaaatcggccaggcttctggtttcacgccgtctcta
caaggtggcggtgcgcccatcggcggcgtttctccacaacaactcggtgcctttcagttt
cctcaggttggccagcagcagcagctaggcgttccggggaacacttcgaatcagcattcg
catcgccgtaatcaatcggctctcccaggcttcggaatgggcggtcctcccccagctcca
tcttctggagcttcgggttattcggactacagccaacagcaacagggtaacttccaaagg
aacgagaacggggctcatggccgtggccgtgggggcccttcgggcggtggtcaccagcga
cgtcattcccttgctctccctgaagcgaagaaggctgcggagctcgctcagcaaaagcgg
gcggcatctgggttccaattccctgcccccaccggtgactcgtctgaggccgcacccgca
tccgacgacaaaccaagcaccccgaatccaacacagtcgtctcaaggattgggtcttcag
cgtgccggcaacatcagagccagtgctcatggccgcagtcagtcaatggctgtgggtggt
aaccgcggctctttgtctggtcgtggtcctggtggttttcaattccctgcgaatgatggt
tcctctggccctgagaaccaacgccgaggcagccaagcgtcccacgcccgaaccccatct
aggaactttgacggcaactggcgccagcccaacaaccaatctcaaggccaggaccaatct
aaaggtctcggacagcagaactcaggatttcagcccggacaccgtgcacgtgcgtctatg
aaccagtcaatcggctctatcggttccttccaataccctggccagcctcagctcattcaa
ttgccccaaggccaggtggttatggctcccccacaaatgtttggtggagcccagcagctg
aaccccttgcaactcgctcagcttcaagccctgcagcagagtgggcaactaaacggtcaa
ggtctaggtggcctccaagctagtcagcacgccccccagccgctgtctgcccagcaaacc
caacagcagcagcagcagcagcggaagactctgttcactccctatcttccccaggccaat
cttcccgcgcttttgtctaacggtcaactcgtctctggtgtcctgagagtgaacaagaag
aatcgttctgatgcgtatgttacgactccagacttagatgccgacatcttcatctgcggt
agcaaggatcgaaaccgtgctcttgagggtgatttcgtggccgtcgaactacttgacgtt
gacgaagtctggtcccagaagaaagagaaagaagagaagaagaaacgcaaggatatcacg
gacgcgaggtccgctagtaatgctggaacagacaagatgtcccgctcagactctactggg
gaccgtcaagaggtgggacctgacggtagcattcgtcggcgtggcagtctccgacagcgt
ccaacccagaagaagaatgacgatgtcgaggtcgagggtcagagcctgcttctggtcgaa
gaagatgagattagtgatgaacagaagcccctatacgctggtcatgtcgtcgccgttatc
gaacgtattgctggccagatgttctccggcacacttggtctactccgccctagcagtcaa
gcaacgaaagaaaagcaggaagccgagagacttgcgagagatggtgcccatggtcgtcat
caagaccggcaacaagataagccgaagatcgtttggttcaaacctaccgacaagcgtgtg
cctttgattgctatccccacagagcaagccccgcgcgatttcgtcgagaagcatcaagac
tacgctaatcgtattttcgtcgcttgcatcaagagatggcccatcacgtcgctgcatccc
ttcggtactctggttgaacaactgggcgaaatgggtgatctaaaggtggaaactgaggct
ctcctccgcgacaacaactttggctccgacgagtttactgatgccgtgctgaagagcatt
ggctgggagaactggtcaatttcaagtgaaggtgatttgtcttcccgtcgggacttccgc
caggaaactacattcactattgaaccgaccgggaccagcgaactcgacaacgcctaccat
ttcaaagctctgcccgatggaaaggcggagatcggcatccacgtcactgacatcgctcat
tttgtgaaacccaattcgctggttgatcgagaggccaagaaacgcggcactgccgtttat
cttgttgatcgtctagtgaaaatgctgcctccgcgtatcgcgactgaactatgcgctttg
ctcccaggtgaggagcgcttgacagtcagtgtcgttttcaaggccaacccagaaacgggg
gccattgacgacgatatttggatcggcaagagtattatcaagagcagcggcaagctagga
ttcgatgaggttgagtctgtaattaagggaacgtcggatgttccattgtctggagtctcg
gtggatatcatccgtggtttacagcgcaccgcctcgaaattccgtgaagcgagactcgga
aatcgtgtttctcagatccctcctctccgtcttcttcattctctcgatgacgagaacgtg
ccggtggaaagcaacatctttggctcttcggctgtccgtgaactcgtggaagaattaagc
tgcaaagcgaacttcctcgttgcccgcaagttggttgcagctctgcctgacaaagctttc
cttcgccgccagcaatcaccaaacccccgtcgcctccactcatttgtcgatcgcatgaac
agactcgggtttgggtttgacgaatctagcagcggaagcttgcagagtagtctctgcaag
gttaaggacgatgatttgcgcaagggaatggaaacaatcttcgtgaaatccatgcagcgt
gcgaagtactatgtggcaggcactgtacaggatgaaatgcgccctcactatactctcaac
ttgcctgtgtatactcacttcactaaccctctccgccgctatgctgatgttattgtccac
cgccaactggaagccgttctgtctgatggtgctatcgagttctcagacgacgtcgaatcc
ctcagcaagaccgctgatatttgcaacaataagaaggattcagcgcacaacgcccaggag
cagagcgttcatatcgaagcctgtcgcaatatggacaaactacgccaagagattggtggt
gacctcattagcgagggtattgtgctttgcgtctacgagtccgcgttcgatgttctcatt
ccagaatacggcttcgagaaacgtgttcactgcgaccagcttccactgaagaaagcggag
tatcgaaaggaaactcgtgtcttagaactatactgggagaagggcgtgccttcgtcggcc
tatattcccgaggatgaacgccccaagcccgccaattcgcgtgctgcccaggcagccgca
gccgcaagggaagccgaagctgctcgtgaacgtgccagagaaagggaggaagctctgagg
aggcagactgagaccggaacgatgtccgctgatgatgtggatgccttgtttgatgatgac
gacgatgtctccgaggtcacggaaatggctgctggtgtgtcgttgaactctgccgaccgc
tcaactcagagcatgccaccctctcctacccgcaatggccatatgccgcaagctccgcaa
cgcacgctttcagatcctaagattgcaacgaatactgttgatgcacctgaaactaagctt
acgaacaaggagaagtatctcagtctcttcaagctccgcgaagaagggggagagtacatt
caggacgtgacagaaatgacacgcgtgcctatcattctgaagactgacctcagcaagagc
cctccttgccttactatccgctcagtcaacccctacgcactgtaa
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