Aspergillus nidulans: ANIA_03014
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Entry
ANIA_03014 CDS
T01016
Name
(RefSeq) SKI complex subunit tetratricopeptide repeat protein SKI3
KO
K12600
superkiller protein 3
Organism
ani
Aspergillus nidulans
Pathway
ani03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ani00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ANIA_03014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ani03019
]
ANIA_03014
Messenger RNA biogenesis [BR:
ani03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
ANIA_03014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_22
TPR_19
TPR_2
TPR_1
TPR_CcmH_CycH
TPR_17
TPR_16
TPR_12
TPR_8
TPR_14
TPR_11
TPR_7
ARM_TT21_5th
TPR_Slam
TPR_6
TPR_10
TPPII_C
ARM_TT21
TPR_9
Motif
Other DBs
NCBI-GeneID:
2874052
NCBI-ProteinID:
XP_660618
UniProt:
Q5B8W6
LinkDB
All DBs
Position
VI:complement(2046560..2050936)
Genome browser
AA seq
1410 aa
AA seq
DB search
MSSKSALKEVRAALDAKNFELAADKAKAIVKEQPQNYHANVFLGLAQDKLNHFLESERAY
LAATRIKGDDKTAWQGLISLYERQGIQYLEQYREVVIKLGLVFAALDDKHRCQDVVDKYV
AFTRKNGTRLQYKRALELHLPTSPLYDYLEGRLPHPAHTYQRLIEISESEEREFINREIG
ERRTRLGARIDQVTLEVKRDAYRRSELEELYRGIVNWSHDDQIRRTYEEKLLQRAYDVLT
VLPANEKHAKREEVLQAARDMVIIKHPFELAWKIVLEWQDVENFSQWDRPFLEDFIEFFP
GDDLTKVLKGFLASDLSPFPKEPAKRNEEAEKSENGNGEEVAAQDRLLMMVEGFEMSSAS
IVAHRIMAELYSSLEEYESVVDVCRKGLQNVDDLVRRTGISLQNTSDSLNIALANSLIYH
QSPRNHPEAQRIFQDILQRHPTSTSCLLGIGLILKVDEDYPEAVNFLERALERDHSNLKV
RGELSWCRALNGDLSSGLSGLQDVLEELQASEKENRVFKGEILYRIGYCQWEIDPSPAAR
KNRAGAYASFLASVQANISFAPAYTSLGLYYADYKKDKVRARRCFHKAFELSPSEIVAAE
RLARTFADQKEWDLVEAVSQRVVDSGKAKPAPGSKRKGYSWPYAALGTVQINKQQYPKSI
VSFQAALRISPDDYHSWVGLGESYHNSGRYIAATKAFYHAQQLEPTLSNTEKGQIWFARY
MLANVKRELGEYDDAIARYEEVLKIRPNELGVTIALLQTLTENSWKCLESGLFNDCAELA
RKAIIVAKSLATERADIFNLWKGVGDACAILSYVKSKAAKLPMKEVRGLLSTQLEASALC
ILTDVDDVGENHLTALDDGKDILTLANDCMYASILAYKRAIHVSLQDTHAQAVSWYNLGW
AEYRASRCIKLVGEKKKQSRRLLKAAMRCFKRAIELEAGNSEFWNALGVVTTSMSPRVAQ
HAFVRSLHLNDRSAQVWTNLGTLYLIHNDIQLSNEAFTRAQSTDPDYSQAWVGQGFLALL
FGEPREARGLFEHAFDISRSSSRLPKQQYTLTLFDHLVADASVSNEVSQLIQPLFTLYQL
TSQDPSDLPFVHLFSLLAERIGEFSDAESNLRNLSLHVEAEYEVSESATSLSRYAQANAD
IARVLLARQEYEEAAEKAETALMLSSEEDSEKFEPEMYKNLRLSAHLTAGLAHYYMRAMD
NAIDMFRDALQEADNSPDVVCLLAQVLWAKGGEEERTVARQQLFECVESYPDHVGAVTLL
GAIALLDDDRDVIEAVESDLHNMITRDDIEIHQRARLIKLLTAISACVAGDSDVPSETRR
IGEAAAAVMRAPYDPQGWLELSSAAQESHPAEMGVKTALQSVPPRSNLDANDLSKAYSQT
GKASDALRAIMVAPWMQGGWQELSHIVSAT
NT seq
4233 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcaaatcggctctcaaggaggtgcgggcggccctcgatgcgaaaaatttcgag
cttgcagccgacaaagccaaggccattgtcaaggaacagcctcaaaactatcatgcaaat
gtctttcttggtcttgcgcaagataaactgaatcacttcctcgaatccgaaagagcgtac
ctcgcggccactcgcatcaagggcgacgataaaacagcgtggcagggactcataagtctc
tatgaaagacaaggaattcagtacctggagcagtatcgagaggttgtaatcaaacttggg
ctggtatttgctgctcttgacgataaacatcggtgtcaagatgtcgtggacaaatacgtt
gcctttacaaggaagaatggaacccgcctgcagtacaagagagcccttgaactacatttg
ccgacaagcccgctctatgattatctcgaaggtcgtctgcctcaccctgcccatacttac
caacgtctcatcgaaatttccgaatcggaagaaagagagtttattaatcgggagatcggt
gaacgaagaactcgcctcggagcacgtatcgaccaagttactctggaggtaaagcgagat
gcctacaggcggagcgaactagaagagttatatcggggaatcgtcaattggtcgcacgat
gaccaaattcgacgcacatacgaagagaaactactacagagggcatatgatgttcttact
gttcttcccgcgaatgagaagcatgcaaagagagaagaggtgctacaggctgctcgagat
atggttattatcaagcatccgtttgaacttgcttggaagatcgtactggaatggcaagac
gtcgagaatttctcccaatgggaccggccctttcttgaagatttcatcgagttcttccct
ggagatgatcttaccaaggtcctcaaaggatttttggcgagcgacctctctccgttcccc
aaagagccggccaagcggaatgaagaagctgagaaatccgaaaatggaaatggagaagag
gtggctgcacaggatcgcctcctcatgatggtggaagggttcgaaatgtcttccgcatca
atcgttgcccacagaatcatggcggagctttattcgtctctcgaggagtacgaaagtgtt
gtcgatgtatgccgtaagggacttcaaaatgtggatgaccttgtcagaaggacgggtatc
agtcttcaaaacacttccgactctctaaacatagcactggcaaactccctcatttaccac
cagtccccacgaaatcatcctgaagctcagaggatcttccaggatatactacaaaggcat
ccaacttccaccagctgtcttctcggcatcggtctcatcctcaaggtcgatgaagattac
ccggaagcggtcaatttcttggaacgtgctttggagcgggaccattcaaacctcaaagtt
cgtggcgaattgtcatggtgtagagcactaaatggagatctttcttccggcctttcagga
ctccaggacgttctcgaagagctgcaagcttcggaaaaagaaaatcgagttttcaagggc
gagattctctatcgcatcggatactgccagtgggagattgatccatcacctgctgcccgg
aaaaatcgggctggtgcgtatgccagttttctcgcttccgttcaagccaatataagcttt
gcgccggcttatactagcttgggcctctactatgcagattataagaaggacaaagttcgg
gcgcggaggtgcttccacaaggccttcgaactatccccgtctgagattgtcgcagctgag
aggttagcgaggacctttgcagatcaaaaggaatgggatcttgttgaagctgtctcgcaa
cgtgttgttgactctggcaaggcgaaacctgcgcccggctcgaaaagaaaaggctacagt
tggccatacgctgctctcggtacagtccagattaacaagcaacagtatcctaagagtatt
gtttcatttcaagcggctcttcgaatctctcctgatgattatcattcgtgggttggtctg
ggtgaaagttaccacaattccggcagatacatcgccgctacaaaggcattctatcacgcc
cagcagttagaacccacgctctcgaacaccgaaaaagggcaaatctggttcgctcggtac
atgcttgcgaacgtgaagcgggaacttggtgaatatgacgatgccatcgcgagatacgag
gaggtgctcaaaatccgtccgaatgagctgggtgttacgatagcattacttcagacgctt
acagaaaattcctggaagtgcctcgagtctgggctcttcaatgactgtgccgagcttgcc
agaaaggcaatcattgtggccaagtcgctagccactgaaagagccgacattttcaaccta
tggaagggcgtaggcgatgcgtgcgcgatactctcatatgtcaagtcaaaagcagccaaa
ctaccgatgaaggaagtccggggtctactttccactcagctcgaagcttccgctctgtgc
atcctcacagacgtcgatgatgttggagaaaatcacttgacggctttggacgatgggaaa
gatattcttacactggcgaacgactgcatgtatgcctctattctggcatacaaacgtgcc
atccatgtctcgctgcaagacactcatgcccaggctgtgtcctggtacaatcttggctgg
gcagaataccgagcgtccaggtgcatcaagcttgttggtgagaaaaagaagcagtcgcgc
aggcttctaaaggcagcaatgcggtgcttcaagagagccattgagctcgaggctgggaat
tctgagttctggaatgctcttggagtagtgaccacaagcatgagtccgagagttgcgcag
cacgcattcgtccgaagcttgcacttgaatgaccgaagcgcacaggtttggacgaacttg
ggaacactttacctcatccataatgacatccaactatccaacgaggcatttactcgcgca
caatcgaccgatcctgattattcccaggcgtgggttggtcagggtttcctcgctctactg
tttggtgaaccacgggaggctagggggctgtttgagcatgctttcgacatctctcggtca
tcatcaagattgcccaagcagcagtatacactaacgctgtttgatcatctcgttgcagac
gcttcagtgtcaaacgaagtttcccaattgatccaaccgctcttcacactctatcagctg
accagccaagatccctccgacctaccctttgtccatctcttctcccttctagccgagagg
ataggggaattctcagacgccgagtcgaacttacgcaacctcagtttgcatgtcgaggca
gaatatgaagtgtctgaatcggcgacatcactttccagatacgcacaagcaaatgcggac
attgcccgtgtgctcttggctcgccaggaatacgaagaggctgcagagaaggcagaaaca
gcactgatgttgtcgtcagaggaggactccgaaaagttcgagcctgaaatgtacaaaaac
ttgcgcttgtccgcgcatctgacagccggtcttgcgcattactatatgagagccatggac
aatgcaatcgacatgttccgcgatgcacttcaagaagcggataactcgccagacgtcgtt
tgtctgctcgcacaggtcctgtgggcaaagggcggcgaagaggaaaggaccgttgctcga
cagcagctgtttgaatgcgttgagagctacccagatcatgttggagcggttacacttttg
ggggcgatcgcgcttcttgacgacgacagagacgtcatcgaggccgttgagtccgatctc
cacaacatgatcaccagagacgatatcgagattcatcagagagcgaggttaatcaagctc
ttgactgcaatctccgcgtgcgttgctggtgattcagatgtcccaagtgagacgagacgt
atcggagaggccgctgcggcggtaatgagagcgccttacgaccctcaaggctggctggaa
ctatcctcggctgcacaagaatcacaccctgctgaaatgggcgtcaagaccgctctgcag
agtgttcctcctcgaagtaatcttgacgctaacgacttgtcaaaggcatattcacagacc
ggaaaggctagcgatgcactgcgggcgatcatggttgcgccatggatgcaaggcggttgg
caggaactgagccatatagtctcagctacctag
DBGET
integrated database retrieval system
