Aspergillus nidulans: ANIA_03812
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Entry
ANIA_03812 CDS
T01016
Name
(RefSeq) exosome non-catalytic core subunit SKI6
KO
K11600
exosome complex component RRP41
Organism
ani
Aspergillus nidulans
Pathway
ani03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ani00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ANIA_03812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ani03019
]
ANIA_03812
Messenger RNA biogenesis [BR:
ani03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
ANIA_03812
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
ANIA_03812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
2873233
NCBI-ProteinID:
XP_661416
UniProt:
Q5B6L8
LinkDB
All DBs
Position
II:complement(2921624..2922696)
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AA seq
265 aa
AA seq
DB search
MPLDTSTTYPLTKLRLDGRRWNELRLLQAQISTNPASSGSSYLAMGNTTILCSVHGPAEG
RRGDATGGSAGSSGAVVEVDVNIAGFASVDRKRRAGGSDRQSGRIASTLRSAFQSHLHTY
LYPHSTISIHVSVLSSDGSVLAAAVNACTLALVDAGIPMPGLLCGCTAGMSGSASTPRDP
MNDTLDPLLDVSLPEEQELPFLTVATTSAPAVMTDGDEDDMKVSMLTMDSKVHYSYIETM
LAVGVDGCKQVREILDSVIKGSSRR
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgcctctcgatacctctacaacataccctctcacgaaactgcgtcttgacggtcggcga
tggaacgagcttcggctacttcaagcacaaatatccacgaacccggctagctcagggtca
tcctatttggcaatgggaaatacaaccatcctatgctcagtacacggccctgcagaaggg
cgtcgaggcgatgcgaccggtggctctgcgggttcttcaggagcagtggtggaagtcgat
gtgaacatcgcagggtttgcgagcgtcgaccggaagcgacgagcaggcgggagtgataga
caatccggccgcattgcgtcaacattgcgttccgctttccaatcgcaccttcacacatat
ctgtacccacatagtacaatcagcattcacgtctctgttttgtcgtcggacggctcggtt
ctcgccgccgcagtcaatgcctgcacgctggcactggtggacgccgggataccgatgccc
gggttgctgtgcggatgtacagcagggatgagtggcagtgcctcgacgccaagagatccg
atgaacgacaccctggaccctttgttggatgtctccttaccggaagagcaagagctccca
ttccttactgttgcaacgacctcggctcctgccgttatgacagatggcgatgaagatgac
atgaaagtctcgatgctgacaatggattcaaaagtgcattacagttatatcgagacgatg
ctggctgtaggcgtggatgggtgtaagcaggtccgtgaaatcctcgacagtgtgatcaaa
ggatcgagccggaggtga
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