Aspergillus nidulans: ANIA_04523
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Entry
ANIA_04523 CDS
T01016
Name
(RefSeq) U4/U6-U5 snRNP complex subunit PRP8
KO
K12856
pre-mRNA-processing factor 8
Organism
ani
Aspergillus nidulans
Pathway
ani03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ani00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ANIA_04523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ani03041
]
ANIA_04523
Spliceosome [BR:
ani03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
ANIA_04523
Complex C
U5 SnRNP specific factors
ANIA_04523
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
PRO8NT
U5_2-snRNA_bdg
U6-snRNA_bdg
PROCT
RRM_4
Hom_end_hint
Hom_end
Motif
Other DBs
NCBI-GeneID:
2872315
NCBI-ProteinID:
XP_662127
UniProt:
Q5B4K7
LinkDB
All DBs
Position
III:complement(<1764286..>1773342)
Genome browser
AA seq
2945 aa
AA seq
DB search
MASLPPPPPPGWGASAPPSMPLAPPPPGYQPPADPNVAKYAQKKTEWLRTQRNRFGEKRK
GGFVETQKADMPPEHLRKIVKDIGDVSQKKFTNEKRSYLGALKFMPHAVLKLLENMPMPW
ESTREVKVLYHVNGCLTLVNETPRVIEPVFHAQWATMWVCMRREKSDRRHFKRMRFPPFD
DEEPPLSWSENIEDVEPLEPIQMELDESEDSPVYEWFYDHRPLLDTPHVNGPSYRKWNLD
LPQMATLYRLSHQLLSDVVDQNYFHMFDLNSFLTAKALNVAIPGGPRFEPLYKDIDPNDE
DFSEFNAIDRIIFRAPIRTEYRVAFPFLYNTLPRSVKVSWYSHPQVVYVRTDNHPNLPAF
YFDPVINPISSRSVAPKNITVSHEDEIFGPGGYEDDFELPAEVEPFFADEDLYTPETASA
IALWWAPHPFNKRSGKMVRAQDVPLVKHWYLEHCPQGQPVKVRVSYQKLLKTYVLNELHR
KKPKAQNKQDLLKTLKSTKFFQQTTIDWVEAGLQVCRQGFNMLNLLIHRKNLTYLHLDYN
FNLKPVKTLTTKERKKSRFGNAFHLMREILRLTKLIVDAQVQYRLGNIDAFQLADGILYA
FNHVGQLTGMYRYKYKLMHQIRSCKDLKHLIYYRFNSGPVGKGPGCGFWAPAWRVWLFFM
RGIIPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMADLMDMMPEGI
KQNKVNTVLQHLSEAWRCWKSNIPWKVPGLPAPIENIILRYVKSKADWWISVAHYNRERI
RRGATVDKTVAKKNLGRLTRLWLKAEQERQHNYLKDGPYVSSEEAVAIYTTMVHWLESRK
FSPIPFPSVSYKHDTKILILALERLRESYSVKGRLNQSQREELALIEQAYDSPGTTLARI
KRFLLTQRAFKEVGIDMNDNYSNINPVYDVEPIEKITDAYLDQYLWYQAEQRHLFPAWIK
PSDSEVPPLLTYKWAQGINNLSNVWETADGETNVMIETELSKVYEKIDLTLLNRLLRLIM
DHNLADYITSKNNVQLSYKDMNHTNSYGLIRGLQFSGFVFQFYGLMIDLLLLGLQRASEM
AGPPQSPNDFLQFRDRATETRHPIRLYTRYIDKIWVFFRFNADESRDLIQRFLTENPDPN
FENVIGYKNKKCWPRDCRMRLMRHDVNLGRAVFWDLKNRLPRSITTIEWDDTFASVYSKD
NPNLLFSMSGFEVRILPKCRNLNEEFSVKDSVWSLVDNSTKERTAHAFLQVTEEDIQKFN
NRIRQILMSSGSTTFTKIANKWNTALIALFTYYREAAVSTVNLLDTIVKCETKIQTRVKI
GLNSKMPSRFPPAVFYTPKELGGLGMISGSHILIPASDKRWSKQTDTGITHFRAGMSHDE
ETLIPNIFRYIIPWEAEFIDSQRVWMEYSQKRMEAQQQNRRLTLEDLEDSWDRGLPRINT
LFQKDRSTLSFDKGFRLRAEFKQYQLMKSNPFWWTSQRHDGKLWNLNAYRTDVIQALGAF
PSWEGLFWEKACLANGTQLLRYDGTKVNVEDVKEGDLLLGPDGGPRRAFNVVSGKDRLYR
IKIDGDKEDLVVTANHILVLHRAKAMNTSVCFDRSKEQQGGAGEQLDISEVSAAERYDTV
EMTAAEFAALHPQERSWYRAIRCPGFELPEQDVPVNPYFLGLWLGDESRNQSAIYSNHEE
ALREFLVSHAAELDMHLVYHGQSAYSTVCNKDRPTNKRIGPANQTQTVRPTIRQTRRTIR
QQRLAAEHAAAEYTTQRETASLTPLLESPTSDKHGLLSSVETPGRLSDSVTTELPMSRSA
SAMRSIRTASGLSEFNDVTNVSASMPDIQNSGIKNQGRIAKVTRQQDSKGEVDFRQQYSQ
AIKDDLELLETDIEDDVASSDEIEDVCVVGSENELIGSEKQDQSGRRRQIHRLRTGHRGY
GDLSDDEQEQLLDSVVERYAGDSRLNTLQQELSKMGILNPETGPINDKKRIPQVFMQNSR
SVRLSVLAGLLDSDGWYIYPENMFGFAQSELCHKELFWDVVTLARSLGFGVWTKKRMMPD
PTGKRMSPMLVAQISGDLAEIPCVLARKKAMPRLIPQSHSFAIKDISLESEATEWAGFRV
DKDQLYLRHDYVVLHNSGFEESMKFKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVG
FQVQLDLTGIFLHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQELEQLGIEAVQ
KETIHPRKSYKMNSSCADILLFATNKWNVTRPSILFDTKDVYEPTTTNKFWLDVQLRYGD
YDSHDIERYVRAKYLDYTTDSMSIYPSATGLMIAIDLAYNLYSAYGQYFPGLKTLIQQAM
AKIMKANPALYVLRERIRKGLQLYASESNQEFLNSQNYSELFSPQIQLFIDDTNVYRVTI
HKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIR
SLPVEEQPKQLIVTRKGLLDPLEVHLLDFPNISIRASELQLPFQAAMKVEKLADMILRAT
EPQMVLFNLYDEWLKTISPYTAFSRLILILRALHVNIDKAKIILRPDKSVITLEHHIWPS
LSDEDWMKVEVQLRDLILNDYGKKNNVNVQSLTSSEVRDIILGMEISAPSLQRQQAAEIE
KQQEEAKQLTAVTTKTQNVRGEDIIVTTTSQYEQQSFASKTEWRTRAIATSNLRTRANNI
YVSSDDIRDEGYTYIMPKNILKRFIMIADLRVQVAGFLYGSSPPDNDQVKEIRTIVMVPQ
VGNTREVQLPQQLPQHDYLNSLEPLGVIHTISGNEPPYMTAQDVTQHSRLMNAHSSWDKK
TVTMTVSFTPGSVSLAAWGLTPQGYKWGAENRDTTSDQPQGFSTSMGEKCQLLLSDKIRG
YFLVPEDNVWNYSFMGSSYGSVEKRPVYVKIDTPLRFYDDQHRPLHFQNFAELEDIWVDR
SDNFA
NT seq
8838 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgctgcctcctcctcctccaccaggatggggtgcgtcagcgccgccctcgatg
cctttggcgccgcctccgccgggctaccagccgccagccgacccgaacgtcgcgaagtac
gctcagaaaaagacagaatggctgcggacgcaacggaaccggttcggagagaagcgaaag
ggcggatttgtcgagacgcaaaaggctgatatgcccccggagcatctccgtaagatcgtg
aaggatatcggcgatgtgtcacagaagaagttcacaaacgagaagcgcagctatctcggc
gctctcaagtttatgccccatgctgtgctgaaactgttagagaacatgcctatgccttgg
gagtcaacgagagaggtgaaggttttgtaccatgttaatggctgtcttactcttgtaaat
gaaacgcccagagttatcgagcctgtcttccatgctcagtgggcgacgatgtgggtgtgt
atgcgacgagagaagagtgacagaagacatttcaagcgtatgcgatttcctccatttgac
gacgaagaaccgccgctttcgtggtcggaaaatatcgaggatgttgagccgctagagccg
atacagatggaacttgatgagtctgaagatagcccggtatacgaatggttttatgaccac
cgaccactgcttgatacaccgcatgtgaacgggccgagttatagaaaatggaacttggat
cttccgcagatggccacgctttaccggttaagtcaccagcttttgagtgatgttgttgac
cagaactactttcatatgttcgacctgaacagcttcttgacagccaaagctctgaacgtt
gctattcccggtggacctcgctttgagcctctgtacaaggacattgatcctaacgacgag
gactttagcgagttcaatgcgatagaccgcatcatcttccgcgcgccaattcgaactgag
tatcgagttgcgttccccttcctctacaatacacttccgagaagcgtcaaggtctcttgg
tactctcaccctcaagttgtatatgtccggaccgacaatcaccctaaccttcctgctttc
tacttcgaccctgtcatcaaccctatctcttcccgctccgtcgcgcccaaaaacattaca
gtcagtcacgaggatgagatttttggacctgggggctacgaagatgacttcgagcttccc
gctgaggtggagccattcttcgctgatgaagacctctacacgcccgaaactgcctctgct
attgctttgtggtgggctcctcatccattcaacaagcgttccggcaaaatggtccgcgcg
caggacgttcctctagtcaagcactggtatctggaacactgccctcaaggtcaacctgtc
aaagttcgcgtgtcttaccagaaacttctcaagacgtatgtcctcaacgaacttcaccgg
aagaaacccaaggcccaaaacaagcaggacctgctaaaaaccctgaagtcgacgaaattt
tttcagcagacaacgatagattgggttgaggccgggttgcaggtctgccgccagggcttc
aacatgctgaaccttttaattcaccgcaagaacctgacctacctgcacttggattataac
ttcaacttgaagccggtcaagaccttgaccactaaagagcgcaagaagtcacgattcgga
aacgctttccatctgatgcgagagattcttcgtctcaccaaactcatcgttgatgcacaa
gtccagtaccgcttgggaaatatagacgccttccagcttgctgatggtattctctacgcc
ttcaatcacgtcgggcagctgacgggtatgtaccgctacaaatacaagctgatgcaccaa
attcgatcgtgcaaggacttgaagcatctgatctactaccgcttcaactctggccctgtt
ggtaagggccccggttgcggtttctgggctccagcatggcgtgtctggctattcttcatg
cgtggtatcattcctttgcttgaaaggtggctcggaaacctgctttctcgccagtttgag
ggccgtcacagcaagggagttgccaagacagttaccaagcagcgtgtagagtctcacttc
gatctggaacttcgcgcgtctgtcatggctgatttgatggacatgatgcccgagggtatc
aagcagaacaaggtgaacacggtgcttcagcacctgtcagaagcatggaggtgttggaag
agcaatattccttggaaggttcctggtctccctgcgcctatcgaaaacattattttgcga
tatgtcaagagcaaggcggattggtggatctcggtggcgcactacaaccgtgagagaatt
cgtcgtggtgccacagtcgataagaccgtcgctaagaaaaatctgggccgtcttactcgg
ttgtggctcaaggctgagcaggagcgtcagcataactacctcaaggacggtccgtatgtg
tcgtctgaggaagctgtggcaatctataccacaatggtccactggctggaatctcgaaag
ttctcacctattccgttcccaagtgtctcttacaagcacgatactaagattctgattctc
gctttggaacgtctgcgtgaatcctactctgtcaagggcaggttgaaccaaagtcagcgt
gaagagctggcccttatcgagcaagcatacgattctccaggaacaacactggcacggatc
aaacgattcctacttactcaacgagcatttaaggaagtcggaattgatatgaacgacaac
tacagcaacatcaaccctgtgtatgatgttgagcccattgagaagatcactgatgcatac
cttgatcagtatctctggtatcaagctgagcagcgtcatttgtttcccgcctggatcaag
ccgtctgattctgaagtccctcctctgctgacttacaagtgggcccaaggaatcaacaat
ctatccaacgtctgggaaactgccgatggtgagaccaacgtgatgatcgagacagagcta
tctaaggtctacgagaagattgatcttacgctgctgaaccggctcctgcgtttgattatg
gaccataatctggcggattatattacctcgaagaacaatgtacagctgagctacaaggat
atgaatcataccaacagctatggtttgatccgtggtctccagttctctggcttcgtgttc
cagttctacggattgatgatcgatttgctcctccttggcttgcaaagagcaagcgaaatg
gctggtcctccccagagcccgaacgacttcctccagttcagagaccgagcaactgagacg
agacacccgattcggttgtatactcgttacattgacaagatatgggtcttcttccgtttc
aatgcagacgaatcgcgcgacttgattcaacgcttcctgaccgagaatcctgacccgaac
tttgagaatgtcatcggttacaagaacaagaagtgctggccgcgagactgtcggatgcgt
ttgatgcgccatgatgtcaacttgggccgtgctgtcttctgggatttgaagaatcgtctc
cctcgctccattaccaccattgaatgggacgacacctttgccagcgtttacagcaaagat
aaccctaatcttctgttttccatgtccggctttgaggttcggatccttcccaagtgccgc
aatcttaatgaagagttctcggtgaaagatagcgtgtggtcgttggtggacaactccacg
aaagagcgtacagcacacgccttcctacaagttacggaagaggatattcagaaattcaac
aaccgaattcggcagattctgatgtcgtccggctcaaccacctttaccaagatcgcaaac
aagtggaatactgctctgattgccctctttacgtactaccgtgaagctgctgtgtccacc
gtcaacctcctcgacaccattgtcaaatgtgagaccaagatccagactcgcgtcaagatc
ggtctgaactccaagatgccgtcccgtttccctccggccgtcttctataccccgaaggaa
ctaggaggcctcggtatgatttcaggctcgcacatcctcattcctgccagcgacaagcga
tggtccaagcaaaccgataccggaatcacccatttccgcgcgggtatgtcacatgacgag
gaaactctaatccccaacatcttccgatacatcataccctgggaggccgaattcatcgac
tctcagcgcgtgtggatggaatactcgcagaagcggatggaggctcagcaacagaatcgt
cgtcttaccctggaagatctcgaagacagctgggatcgcggtttgccccgtattaacact
ctattccagaaggaccgcagcactctcagcttcgacaagggtttccgtttgcgcgctgaa
ttcaagcagtaccaactcatgaaaagcaatcctttctggtggactagtcagagacacgat
ggtaaattgtggaatctgaacgcttaccgtaccgatgttattcaggcactgggtgctttc
ccgtcctgggagggtctattctgggagaaagcttgtcttgccaacggcacccagttgttg
cgatacgatggcaccaaggtcaatgtcgaggatgtcaaggagggagatctccttctcggt
cctgacggtggacctcgccgagctttcaacgttgtcagcggcaaagatcgtctctaccgt
ataaaaatcgacggggacaaggaagatctcgtcgttaccgcgaaccatatcctggtcctt
catcgagcgaaagcaatgaacaccagtgtgtgcttcgatcggtcaaaagagcagcaaggt
ggcgctggcgaacaactggatatatctgaagtatcagcagcagagcgctacgacactgta
gaaatgactgccgctgaatttgctgcactacacccgcaggaacgaagttggtatcgagcc
atcagatgtcctggtttcgaattgcctgagcaagatgtgccagtgaatccgtatttcctc
ggcttgtggctgggtgatgaaagccgcaatcaatcggcaatctattcgaatcatgaagaa
gcactccgtgagttcctcgtcagtcatgctgctgaattggacatgcatcttgtctaccat
ggtcaatcggcatacagcaccgtctgtaacaaagacagaccaaccaataaacggattggg
cctgcgaatcaaactcaaacagtgcgtcctacgattcgtcaaactcgacggaccattcgc
cagcagcggctcgccgcggagcatgccgctgcagagtacaccacacagcgtgagacagct
agcttaactccccttctcgagtcgcccacgagtgacaaacacggccttctttctagcgtc
gagactcctgggagactgtccgattctgtgacaaccgagctcccaatgtccagatctgca
tctgccatgagatctattcgaactgcatccggactgtccgaatttaatgatgtgacgaac
gtgtccgcttccatgccagatatccaaaactccggtattaagaaccagggaagaattgca
aaggtgacccgacagcaggattccaagggagaagtcgacttccgacagcaatattctcaa
gcaatcaaagatgacctggagttgcttgaaacagatattgaagatgatgttgccagctct
gacgaaattgaggatgtttgcgtggtaggctcggaaaatgaactgattggaagtgaaaaa
caagaccagtccggtcgccgtcgccaaatccatcgtctacgaactggtcatcgaggatat
ggcgatctaagtgatgacgaacaagagcaactcttggattctgtcgtcgagcgttatgct
ggggattctcgtctgaatacactccagcaggaacttagcaagatgggtatactcaatcct
gaaacaggacctatcaacgacaagaagcgtattccacaagtctttatgcaaaactcgcgt
tccgttcgcctttctgtgttagcaggacttcttgatagtgacggatggtatatttaccca
gaaaacatgttcggtttcgcgcagagtgagctctgtcataaggagctgttctgggacgtt
gttacgctagcaagatctttgggattcggcgtttggacaaagaagcgcatgatgccggac
ccaacaggaaagaggatgtcaccaatgctggtcgcccagatatccggagacttggctgaa
atcccatgtgttctcgcaagaaaaaaggccatgccgcgtcttattccccagtcacatagt
tttgccatcaaagatatctctctcgaatctgaagcaactgaatgggctggtttccgcgtt
gacaaagatcaactctatctacgacatgactatgttgtactgcataacagtggcttcgaa
gagtctatgaaattcaagaagctcacgaatgcccagcgttctggtttgaaccaaattcct
aaccgtcggtttacgctatggtggtcgccaaccattaaccgtgccaatgtctacgttggt
ttccaggtgcaactggatctcacgggtatcttcttgcacggaaagattcccactctcaaa
atctcgttgattcaaatcttccgtgctcacttgtggcaaaagatccacgagtccgtagtc
atggatttgtgtcaagtctttgaccaggaacttgagcagcttggcatcgaagcagtccag
aaggaaaccattcacccgcgtaagtcatacaagatgaacagttcgtgtgcagatatcttg
ttgttcgccacgaacaagtggaacgtaacccggccttccatcctcttcgacactaaggat
gtgtacgagcctaccacgacaaacaaattctggcttgatgtgcaactccgctacggtgac
tacgactctcacgacattgaaagatacgttcgcgctaaatacctggactacacaaccgac
agcatgagtatctatccgtctgcaacgggtctgatgatcgcaattgaccttgcttacaac
ctgtactcggcatacgggcagtatttccctggcctgaaaacgttaattcagcaagcgatg
gccaagattatgaaggccaaccctgccctctatgtgttgagagaacgtattcgaaaaggt
ctacagctgtacgcttctgagagcaatcaggagttcctgaactctcagaactattcggaa
ctcttcagtcctcagatacagctgttcatcgacgataccaatgtctaccgtgtcactatt
cacaagaccttcgaaggtaaccttacgaccaagcccatcaacggtgctatattcatcttt
aatccccgcactggacagctgttcctgaagattatccacaccagtgtttgggcgggacaa
aagcgtcttggtcagcttgccaagtggaagaccgcagaagaagtcgcggctcttattcgg
tccttgccagtcgaagaacagcccaagcagcttattgttacccgaaaaggtcttcttgac
ccgcttgaagttcaccttctcgatttccctaatatctccatccgtgcttctgaactccag
ctgcctttccaggcagctatgaaggttgagaagcttgcagacatgattttgcgcgcgaca
gagcctcagatggttctgtttaacctttatgatgagtggctcaagactatttcaccatac
accgcgttctccagattaatcttgattttgcgtgcccttcacgtcaacatcgacaaggcg
aagatcatccttcggcctgataagagcgttatcaccttggagcaccacatctggccctcg
ctttctgatgaagactggatgaaggttgaagtgcaattgcgcgacttgattctgaacgac
tatggcaagaagaacaatgtcaacgtccagagtctgacaagcagtgaagtccgagatatc
attctcggtatggaaattagcgcgccctccttgcagcgacagcaagcagcggagattgag
aagcaacaggaggaggccaagcaactcacagctgtgacaacaaagacgcagaacgttcgc
ggcgaagacatcattgtcactaccacatctcagtacgagcagcagtcgtttgcgtccaag
actgagtggcgtactcgtgcgattgccacgtccaacctccgcactagggcaaacaatata
tatgtctcgtcagacgatatccgcgatgagggttatacgtacatcatgccgaagaacatt
ctcaagcggttcatcatgattgccgatcttcgcgtgcaggtagccggatttctctatggt
agctcgcctccagacaacgaccaagtgaaggaaattcggaccatcgtcatggtcccgcag
gtgggtaacactcgcgaggttcaacttcctcagcagctaccgcaacacgattatctcaac
agcctagagcccctcggagtaatccacaccatctccggcaatgagccgccatacatgact
gcacaggacgtgactcagcattctcgcctgatgaatgcccattcatcctgggacaagaag
acagtgacgatgaccgtatcgttcacaccgggttcggtctcccttgcagcatggggtctt
actccccagggttacaagtggggagccgagaaccgggatacaacttccgatcagccgcag
ggattctcgaccagcatgggcgagaagtgccagttgttgttgagtgacaagattcgcgga
tacttcctcgtgcccgaggacaacgtctggaactacagcttcatgggaagctcgtacgga
agtgtcgagaaacgcccggtatatgtcaagattgacaccccgcttcggttttacgacgac
cagcatcgcccactgcacttccagaacttcgcagagctggaggatatttgggttgaccga
tctgataactttgcttaa
DBGET
integrated database retrieval system
