Aspergillus nidulans: ANIA_08722
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Entry
ANIA_08722 CDS
T01016
Name
(RefSeq) ATP-dependent RNA helicase SUB2
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ani
Aspergillus nidulans
Pathway
ani03013
Nucleocytoplasmic transport
ani03015
mRNA surveillance pathway
ani03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ani00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ANIA_08722
09122 Translation
03013 Nucleocytoplasmic transport
ANIA_08722
03015 mRNA surveillance pathway
ANIA_08722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ani03019
]
ANIA_08722
03041 Spliceosome [BR:
ani03041
]
ANIA_08722
Enzymes [BR:
ani01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ANIA_08722
Messenger RNA biogenesis [BR:
ani03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
ANIA_08722
Spliceosome [BR:
ani03041
]
Complex C
Other components
EJC/TREX
ANIA_08722
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
ANIA_08722
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
CMS1
Ned1_M
Motif
Other DBs
NCBI-GeneID:
2868556
NCBI-ProteinID:
XP_050467805
LinkDB
All DBs
Position
III:2962860..2965255
Genome browser
AA seq
369 aa
AA seq
DB search
MSHEEDLIDYSDEELQTTDAAATTATPAANGGQAKKDGELTVTGGRADKKGSYVGIHSTG
FRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQ
LEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDIEVLSNKDT
FPNIIVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPTDKQV
MMFSATLSQDVRPICKKFMRNPLEVYVDDDTKLTLHGLQQYYIKLSEAEKNRKLNELLDS
LEFNQVIIFVKSTIRANELDKLLRECNFPSIAVHSGVSPGRTYQALQRVQGIQQAYLCRH
RRVRTRYRY
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgaggaagatctcattgactactccgatgaggagcttcagaccactgatgcc
gcagccaccactgccacccccgccgccaacgggggtcaagcgaagaaggacggcgaattg
acggtcactggtggccgtgcggataagaagggaagttatgtcggtattcattcgaccggt
ttccgcgactttttgctcaagggcgaacttttacgtgctatcaccgattgcggtttcgaa
catccttcggaggtccagcaagtctgcattcccactgcaattctcaatgtcgacgttctc
tgccaggccaagtctggtcttggaaaaaccgctgttttcgtcctcaccactcttcatcaa
ctggagcctgttcctggagagtgctccgttctagttatgtgccacactcgcgagttggcc
taccagatcaagaacgaatatgctcgattcagcaagtaccttcccgacgtgaagactgct
gttttctacggaggtactcccatccagaaggatatcgaggtcctgtcgaacaaggacacc
ttccctaacatcatcgtcggtactcccggtcgtcttaacgctctcgtccgcgacaagaag
ctctctctccgcaacgttaaggctttcgttctggacgagtgtgacaaaatgctcgaccaa
attgatatgcgccgcgatgttcaggaaattttccgcgctactcccaccgacaagcaggtt
atgatgttcagtgccaccctttcgcaggacgttcgacctatctgcaagaagttcatgagg
aacccgctcgaagtttacgtcgacgacgacaccaagcttactcttcacggtctgcagcaa
tactacatcaaactcagtgaggcagaaaagaacaggaagctgaatgagctcctcgacagc
ctggaattcaaccaggtcatcatcttcgtcaagagcacaatccgtgccaacgagctcgac
aagttactgcgcgagtgtaacttccccagtatcgccgtgcactctggtgttagcccagga
agaacgtatcaagcgctacaaagagttcaaggaattcaacaagcgtatctgtgtcgccac
agacgtgttcggacgcggtatcgatattga
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