Aspergillus nidulans: ANIA_10963
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Entry
ANIA_10963 CDS
T01016
Name
(RefSeq) hypothetical protein
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
ani
Aspergillus nidulans
Pathway
ani03018
RNA degradation
ani03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ani00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ANIA_10963
09123 Folding, sorting and degradation
03018 RNA degradation
ANIA_10963
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ani03019
]
ANIA_10963
03041 Spliceosome [BR:
ani03041
]
ANIA_10963
Messenger RNA biogenesis [BR:
ani03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ANIA_10963
mRNA degradation factors
5'-3' decay
Lsm complex
ANIA_10963
Spliceosome [BR:
ani03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
ANIA_10963
Complex C
U2 snRNP components
ANIA_10963
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
LRR_9
Hfq
Motif
Other DBs
NCBI-GeneID:
74896702
NCBI-ProteinID:
XP_050467988
UniProt:
C8VBS9
LinkDB
All DBs
Position
IV:2004660..2005309
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AA seq
98 aa
AA seq
DB search
MLFFSFFKTLTNQVVTIELKNDIRIRGTLKSVDQYLNIKLDDIDVLDLDKYPHLSSVKNM
FIRGSVVRYVVLPRSEVDVGLLEDATRREAANQAGKAR
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgctctttttcagctttttcaagaccctaacgaaccaagtcgtgacaatagagctcaag
aatgatatccgtatccgcgggacgctcaagtccgtcgaccagtacctgaacattaaactc
gacgatatcgacgttctagacctcgataaatatccacatctcagctccgtcaagaacatg
tttattcgagggagtgtagtgcggtatgtggttttgccgcggtcggaagttgatgtgggt
ttgttggaggatgcgacgcggagagaagctgcgaaccaggcagggaaggctcggtga
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