Anopheles nili: 128721619
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Entry
128721619 CDS
T11473
Name
(RefSeq) SKI2 subunit of superkiller complex protein
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
anil Anopheles nili
Pathway
anil03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
anil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128721619
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anil03019
]
128721619
Enzymes [BR:
anil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128721619
Messenger RNA biogenesis [BR:
anil03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
128721619
mRNA degradation factors
3'-5' decay
Ski complex
128721619
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
DEAD
Ski2_N
ResIII
DEXQc_Suv3
Helicase_C
MTR4_beta-barrel
MTR4-like_stalk
ATPase_2
Motif
Other DBs
NCBI-GeneID:
128721619
NCBI-ProteinID:
XP_053671367
LinkDB
All DBs
Position
2:join(32568369..32568380,32568456..32570786,32570889..32571645,32571708..32571886,32571952..32572314)
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AA seq
1213 aa
AA seq
DB search
MAFNPEWLTKPPPVLDDTDDVLRAFILEPKIPTHEPKPYFMPRTPAVEQLYDIPHAPIIT
RIVPDRCPETGKVLDFIETMVQNAGSTAKNSMSLQREPTESLDSARGSASYFPFWPGGFD
EPETVLAGIPSSPMFETNLKTCPPGFISGVDFPSVTSVDDQTGHTAEGSVVDLLSAIADD
DGFELEPVVQQKETTEVKSDDTMDGKKSVDIVDEDLLAMDKELPSGQVLNISTVSNTAVH
SAEWAEMLDISKPVDDFYVKIPVMAHRFPFELDIFQKQAILKLEEHSHVFVAAHTSAGKT
VVAEYAIALSKKHMTKTIYTSPIKALSNQKYRDFKTTFQDVGLITGDIQVDPTASCLIMT
TEILRSMLYCGSDITRDLEYVIFDEVHYITDSDRGHVWEEVLILLPDHVCIVMLSATVPN
TIEFANWVGKTKKKRVYVVSTAKRPVPLEHYLYTGFGGKTKNDSFLIVNEHSKFLQEGYR
KAKESCEARQVKGPAGRRSGPYSQRQEQTLWVGLIDYLQKKDKLPVVAFTLSRNRCDNNA
EALMSCDLTTAREKYAVTSFFQQCLQRLIPPDRALPQVLQMQSCLERGIGIHHSGILPIL
KEIVEMLFARGLVKILFATETFAMGVNMPARTVVFDSTRKFDGLAVRTLQTSEYTQMAGR
AGRRGLDKTGTVIIICKQNIPTDAELNTMILGKPIRLESQFRLTYAMMLYLLRVELVTVE
NMMLHSFREFGKRQELPKSKLELSKVQEKVSSLSKLGDHLAPLGGFYDAAYEYIKLWDEL
LPKQLCQPKAINELKLGRVLLVTDRNHYNKLGILLSVSTQSHKEMKLTVLVLDHESAVPY
APADTLDRGPLWHRMLSLALPYATFSPEGVGGHCVLTLQPANVLEVTKHVIKCDTSSIIR
SWETRLIPRFYDSPPSQTTIEAVASLAELNASVIQTGSATGTLECVRFPRDLENLTLTEQ
LKVALGRMTQWLPYTNIANFEQEFALVYDRKQLERKLEELKFQVSYESMSLYPDYCRKLQ
VLQELKYIDDMQQVAMKGRVACEMGQNELMITELVMRNILTDLQPAEIAALLSSLVFQAK
TDVTPTLTETLQKAVKQFMEVENDIRRVEQQFMVTDGPKKEELNFGLVEVVYEWACNKPF
AEIMTLTDIKEGIIVRCIQQLNETLCNVKDVARIIGDPVLHSKMEEASNTIKRDIVFAAS
LYISSTPIVIADV
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atggcattcaacccggaatggttgacaaaacctcccccagttttggacgatacagacgat
gtgctgcgggcgttcattctcgagcccaaaataccgacacacgaaccgaagccctatttt
atgccacgtactccagccgtagagcagctgtacgatataccacacgcaccaatcatcaca
cgtatcgtaccggaccggtgcccggaaaccggcaaggtgttagacttcatcgagacgatg
gtgcagaatgcgggttcaaccgccaaaaactccatgtcgctgcaacgtgagcccaccgag
tctctcgattcagcgcgaggatcggcttcttactttccattctggccaggcggattcgac
gagccggaaaccgtacttgccggtataccgagcagtccgatgtttgagacaaacctaaaa
acctgtccacctgggttcatctccggagttgattttccatctgtaacctccgtcgatgac
caaacgggtcacacggccgagggcagtgtggtcgatcttctgtcagcgattgctgacgac
gacggtttcgagttggagccggtagtgcaacaaaaagagaccaccgaagtaaagtcggac
gatacaatggatggtaaaaaatctgtcgacattgtcgacgaggatctactggcgatggat
aaggagctacccagtgggcaagtgctgaacatctcaaccgtcagtaataccgccgtacat
tcggccgaatgggccgaaatgctcgatatatcgaaaccagtggatgatttctacgtcaaa
attcccgttatggcgcaccgattccccttcgagctggacattttccagaaacaggcaatc
cttaaactcgaagaacacagccacgtgtttgtggcggcgcacacctccgctggcaagact
gtggtggcggagtacgcgatcgccctgtcgaagaagcacatgaccaaaaccatctacacg
tcgccgataaaggcgctatcgaatcagaagtatcgtgacttcaaaaccacgtttcaagac
gtcggtttaataacgggcgacatccaggtcgatccaaccgcctcctgtctgatcatgaca
accgaaatcctgcgctcgatgctgtactgtggcagcgacataacgcgtgatcttgagtat
gtgatcttcgatgaagtgcattacattaccgactcggaccgggggcacgtgtgggaggag
gtacttatcctgcttcccgaccacgtgtgcatcgtgatgctgagtgcgaccgttccgaac
acgatcgaattcgcgaactgggtgggtaagacgaagaaaaagcgcgtctatgtggtgagc
acggcaaagcggcctgtaccactggagcactacctgtacaccggtttcggtggcaagacg
aagaacgattcgttcctgatcgtgaacgaacacagcaagtttctccaggaaggatatcga
aaggcaaaggaaagctgcgaagcgcggcaagtgaaaggtccggcgggtcgccgttccggt
ccgtacagccagcgacaagagcagacactttgggtcggattgatcgattacctacagaag
aaagataaactgccggtggtggcgttcacgttatcgcgcaaccgttgtgacaacaacgcg
gaagcactgatgtcctgtgatttgacgacggcacgggaaaagtacgccgttacttccttt
ttccagcagtgcctgcagcgactgatcccgcccgaccgtgcactaccgcaggtgctgcaa
atgcagagctgcctcgagcggggcatcggcattcatcacagcggtattctgccgatcctt
aaggagatcgtcgagatgctgttcgcacgtgggttggtgaaaattttgttcgccacggaa
acgttcgcgatgggcgtgaacatgcccgcgcggacggtcgttttcgatagtacgcggaag
ttcgatgggctagccgtacgcacactgcaaacgtcggagtacacgcagatggcgggtcgt
gccggtcggcgtggtctcgacaaaaccggtacagtgatcataatatgcaaacaaaacatc
ccgaccgacgccgaactgaacacgatgatattgggcaaaccgattcgattggagtcgcag
ttccgccttacgtatgctatgatgctgtacctgttgcgggtagagttggtcacggtcgag
aacatgatgctgcacagcttcagggagtttgggaagcgacaggagctaccgaagagcaaa
ctcgagctcagcaaagtgcaagagaaggtgtcgtctttgagtaagcttggtgaccatctg
gcaccgttgggcggattctatgatgccgcgtatgagtacattaagctgtgggatgaactg
ctccctaaacaactctgccaaccgaaggcgataaacgagcttaaactgggacgcgtgttg
ctggttacggatcgaaaccactacaacaagttgggcatactgctctcggtatccacgcag
tcacacaaagagatgaagctcaccgtactcgtgttggatcacgaatccgcggttccgtac
gctcctgccgatacgcttgatcgcggcccgctatggcaccggatgttgtcactcgcacta
ccctacgcaaccttctcaccagagggtgttggtgggcattgcgtgttgacgttgcaaccc
gctaatgtgctcgaagtaacgaagcatgtgataaaatgcgataccagcagcataattcgt
agctgggaaacacggctcattccgcgtttttacgattcacctccgtctcaaacgactatc
gaggcggtggccagtttggccgagctgaacgcgtccgtaatacagaccggttcagccacc
ggtacgctggaatgtgtgcgcttcccgcgggatcttgaaaacctaaccctaacggaacag
cttaaggtggctttgggccggatgacgcaatggctcccgtacacaaacatagccaatttc
gagcaggaattcgcacttgtttacgatcgcaagcagctcgagcggaagctggaagagctg
aagttccaggtgtcctacgaaagcatgtcattgtaccctgattactgccggaagttgcag
gtgctgcaggagctcaagtacattgacgacatgcagcaagtggctatgaagggacgcgtt
gcttgcgagatgggccagaacgagctgatgattacggagctggtgatgcgcaacatcttg
actgatctgcaaccagctgaaattgctgccctgctctcgagcttggtatttcaggccaaa
accgatgtcacgccaacgctcaccgaaactctgcaaaaggccgtgaagcaatttatggag
gtagaaaacgacatccggcgcgtcgagcaacagtttatggttacggatgggccaaagaag
gaggaactgaactttggcctggtggaggtggtatacgagtgggcctgcaacaaaccgttc
gccgagatcatgacgctgaccgatatcaaggagggcatcatcgtgcgctgcatccagcag
ctcaacgagacgctctgcaatgtgaaggatgtcgcccgcatcattggtgatccagtgctg
catagcaaaatggaggaagcatcgaacacgatcaaacgggacattgtatttgcggcaagc
ttgtacatctccagtacgcctatcgttatcgccgatgtgtag
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integrated database retrieval system
