KEGG   Anopheles nili: 128722883
Entry
128722883         CDS       T11473                                 
Name
(RefSeq) THO complex subunit 2
  KO
K12879  THO complex subunit 2
Organism
anil  Anopheles nili
Pathway
anil03013  Nucleocytoplasmic transport
anil03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:anil00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128722883
  09122 Translation
   03013 Nucleocytoplasmic transport
    128722883
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:anil03019]
    128722883
   03041 Spliceosome [BR:anil03041]
    128722883
Messenger RNA biogenesis [BR:anil03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     128722883
Spliceosome [BR:anil03041]
 Complex C
  Other components
   EJC/TREX
    128722883
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    128722883
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 128722883
NCBI-ProteinID: XP_053672541
LinkDB
Position
3:complement(join(28054319..28054624,28054697..28054840,28055575..28055612,28055689..28055844,28055920..28056330,28056407..28057004,28057090..28057683,28057747..28058481,28058560..28059456,28059519..28059903,28059981..28060234,28060307..28060472,28060913..28060965))
AA seq 1578 aa
MFNADTWKLWERSGKSDFLKQCKTLLKDDQQSPLFTRNERKGGISRAIYELVARGIHGQL
KKDSVLQMLGELVSLHNDVPSILLDVFGIFDAETAGTGGDAPPSEDRANFCYIVKETERF
LSEKLLKERLEIDTLQDVGTIKNRSFYTRFIKVKTKLYYKQRRFNLFREESEGYAKLITE
LNQEFNQETITVQNILEIIKSLIGCFNLDPNRVLDITLESFEARPEQDRIFIPLLQAYIN
DGNIICEVLGYKYRYFADVQTPGSLFKVTALLLQHGVIKLDDIYAWLNPPDKSIVADWDA
EMAQAKEYVRKLNIIVTNKDKEPEQEPEFETAPEKYALNQKWGLCEALLMIGDWTTAQQL
IRKLPEQSVMVHEPIARALCRLLHMIIEPVYRLKCALPANIKGRAISMYGVLNKLAPPPV
TSLTKLRLHAFPMFTALGPSLHYDSVLLYKLLRLMRVILTDMNVDPLNPPTPTGTTTEHD
QLYYDILTLLDASVLPALAYMDCNCCVAEEIWSIVKLYPYQYRYSLYARWKNDTFQLQPQ
LIQRRGTAQKQIKALMKRVSKENSKPVGRLIGKLSHCSPGFLFEYILLQIQIYDNLIAPV
VDSLKYLTSLSYDVLGYCLIEALEQVDRNPMQNDGTSISLWLQSLANFCGAIYKKYNIEL
SGLLQYVANQLKSHKSLDLLILKEVVQKMAGIEAAEEMTSEQLQAMCGGELLRGEAGYFS
QVRNTKKSSQRLKEALASNDLAVALCLLIAQQKHCVIYRETAQSHLKLVGKLYDQCQDTL
VQFGTFLGSTYSVEEYVERLPTIHSMLQRYHIHSDVAFFLARPMFSHAINQKYDQLRKAD
SNAKKLSTSQKMAKYLEATAHVMSPVIESVRPLHPPKIWEDISPQFLVSFWSLSMYDLQV
PMESYQREISKLKQLSMAVMESKEQNASKNKKEQERYIALMDKLQDERKKQQEHVDKIMH
RLTNEKDYWFLSRSAKSAKNETITQFLQLCLFPRCTFTALDAIYCAKFVHTIHNLKTANF
STLLCYDRIFCDITYSVTSCTENEATRYGRFLCAMLETVMRWHSDEATFNKECANYPGFV
TKFRVSNQYSEAIDHVNYENYRHVCHKWHYKITKAMVFCLDSKDYMQIRNSLIILMRILP
HFPVLAKLSQIIEKKVEKVREEEKNQRQDLFVLASSYIGQLKAKSGQMMLESDFHQVPEK
TFKSTTSTMATAAEQDTKVAVNGGDVKGGQSTRQTQSGGSSMGNGTMSGNMGGNSSSTSS
FSGGGSGQGTGTSNGNLGSDHRGTGEMIKKEPSSSSSSGSRDIVGTSSMIRETSVSLIRE
KSSKEIKREERAREKEREREEAAAAVASLIADRKREKEKRRDKRDHYDHERESRTNERDL
MPRDRSERDLSSVSNSSNEQQHSSSRRSQDPPEHDREMKRRKLEGSSSKNKHDDGTGSNQ
QLLSESKKERSSKTKEKRDKTDEEKELRKERKLGRKRQDRNPDESLLTDKRLRREEEKAQ
KLLSHQNGDNDGDLPPMSVSSSHREKHHHHHLKEKSPSYGGGGGGSVLRDHRERSHDRGL
DRGEKQYFTKTSRTRSGY
NT seq 4737 nt   +upstreamnt  +downstreamnt
atgttcaacgccgatacttggaaattgtgggaaagaagcggaaaatctgatttcttgaaa
caatgcaaaacgctgctgaaggacgaccaacagagcccactgttcacgaggaacgaacgg
aagggcggcatttcccgggcaatctacgagctggtcgcacgcggcatccatggccagctg
aagaaggacagcgtgctccagatgctcggcgagctggtgagcctccacaatgacgttccc
tcgatcctgctggatgtgttcggaatcttcgacgcggaaacggcaggcaccggaggcgat
gcacccccgagcgaagatcgcgcaaacttctgctacatcgtgaaagagacggaacggttc
ctatcagaaaagctactcaaggaacggttagaaatcgacacactgcaggatgttggcaca
atcaagaaccgcagcttctacacacgcttcatcaaagtgaaaacgaagctttactacaaa
cagcgtcggtttaatttgtttcgcgaagaaagcgaaggttacgccaaactaatcacggag
ctgaaccaggaattcaatcaggaaacgataaccgttcagaacatattggagattattaaa
tctttgatcggttgcttcaatctcgatccaaaccgagtgcttgacatcacactggaatcg
ttcgaagcccggccagaacaggaccgtattttcataccgctgctacaggcgtacatcaac
gatggcaacatcatctgcgaggtgctggggtacaagtatcgctactttgccgacgtccaa
acgccgggttcgctgtttaaggttaccgcactgctgctccagcatggcgttatcaagctg
gatgatatatacgcatggcttaacccaccggacaagtctattgtggcggattgggatgcg
gagatggcccaagcgaaagagtacgttcgcaagctgaacattatcgtcaccaacaaggac
aaggaaccagagcaggagcccgagttcgagacggcaccggagaagtacgcgctcaatcaa
aagtggggtctctgcgaggccctgctgatgatcggtgactggacaactgctcaacagtta
atccgcaagctccccgagcagtcggtaatggtacacgaaccgatagcgcgcgccttgtgc
cgattgttgcatatgatcatcgaaccagtttatcggttaaaatgtgcgctaccggctaac
ataaaaggacgcgctatttcgatgtacggagtactgaacaagctcgccccaccgcctgtg
acctcgttgacgaaacttcgactgcacgcattcccgatgtttaccgcgctgggaccatcg
ttgcactacgattcggtgctgctgtacaaactgttgcggctgatgcgcgtcatcctgacg
gacatgaacgtagatccgttgaacccgccgacaccaactggcacgacaacagagcacgat
caattgtactatgacatccttacgctgttggacgcgtccgtgttacccgcgcttgcctac
atggactgcaactgttgcgtggcggaagagatttggtcgatcgtgaaactgtacccgtac
cagtaccggtacagtttgtacgcacggtggaaaaacgacacgttccagctgcaaccgcag
ctgattcaacggcgcggtacagcgcaaaagcaaatcaaagcgcttatgaaacgggtcagc
aaggagaacagcaaaccggtggggagattgatcggcaagctgagccattgttcaccaggt
ttcctgtttgaatacattctcctgcaaatacaaatctatgacaatcttatcgcaccggtc
gtggactccctaaagtatctgacctccctgtcgtacgatgtgctcggttactgcctcatc
gaagcgctcgagcaggtcgatcggaatccgatgcaaaacgacggcaccagcatctcgctg
tggctgcagagtttggccaacttctgcggtgcgatctacaagaagtacaacatcgagctg
agcggtctgctgcagtacgtggccaaccagctaaagtcccacaagagtctcgatttgctc
atcctgaaggaggtcgtacagaagatggctggcatcgaggcggccgaagagatgaccagc
gagcagctgcaggcgatgtgcggtggtgagctgctgcgtggtgaagcgggttattttagc
caagtgcgcaacacgaaaaaatcatcccagcggctgaaggaagcccttgccagcaatgac
ctggcggttgcactgtgcttgctgatagcgcagcaaaagcactgcgtcatctaccgcgag
acggcccaaagtcacctgaagctggtgggtaagctgtacgatcagtgccaggacacgctg
gtacagttcggaacgttcctcggttcaacgtactcggtcgaggagtacgtggagcggtta
ccaaccatacacagtatgctgcagagataccacatacactcggatgtggcgtttttcctc
gcgcgtcccatgttttcgcatgcaatcaatcaaaaatacgaccaactacgcaaggcggac
tcgaacgcgaagaaactttccacgtcacagaaaatggccaaatacctcgaagcaacggcg
cacgtcatgagtccggtgatcgagtccgtacggccgttgcaccctccaaaaatctgggaa
gacatcagccctcaattcctcgtcagtttttggtcgctctcgatgtacgatctgcaggta
ccgatggaaagctaccagcgggaaatcagcaaactgaagcaactctccatggccgtgatg
gaatcgaaggagcaaaatgcgtcgaaaaacaaaaaagaacaggaacgctacatcgcgctg
atggacaagctgcaggacgagcggaaaaagcaacaagagcacgtggacaaaatcatgcac
cggctgacgaatgagaaagattactggttcctgtcgcggtccgccaaatcggctaaaaac
gaaactatcacccaattcctgcagctgtgcctgttcccacgttgcacattcaccgcgctg
gatgcgatctactgcgccaagtttgtgcataccatacacaatctgaaaacggccaatttc
tccaccctgctgtgctacgatcggatattctgcgacataacgtattccgtaacgtcctgc
acggaaaacgaagcgacccggtacgggcggttcctgtgcgccatgctggaaaccgtaatg
cgctggcactcggatgaggcaacgtttaacaaagagtgcgccaactatcccggcttcgtg
accaagtttcgcgtcagcaatcagtactcggaggcgatcgatcacgtgaactacgaaaac
tatcggcacgtgtgccacaaatggcactacaaaataacgaaggcgatggtgttctgtctc
gactcgaaggactacatgcagattcgcaactcgctcatcatcctcatgcgtatactgcct
cacttcccggtgttggcaaagctgtcccagatcatcgagaagaaggtcgaaaaggtgcgc
gaagaggagaaaaatcagcggcaggatctgttcgtgctagcctcaagctacatcggccag
ttgaaggcgaaatcgggacagatgatgctggaatcggacttccaccaggtgccggagaaa
acattcaaatcgaccacatccacgatggcgacggcagctgagcaggacacgaaagtggcc
gttaacggtggtgacgtgaaaggcggacaaagcacgaggcagacgcaatcaggcggatct
tcaatgggcaatggcaccatgagtggcaacatgggaggaaattcttcatccacatcatca
ttctccggtgggggctctgggcaaggtaccggtacatcgaacggtaacctcggtagcgac
catcgtgggaccggtgaaatgataaaaaaggaaccatcttcatcatcctcttcggggtcg
cgagacatcgtcggcacttcgtcgatgattcgcgagacgtccgtgtcgttaatacgcgaa
aaatcctccaaagagatcaagcgcgaggagcgtgcccgagagaaggaacgggagcgtgaa
gaagcggccgccgcagtcgcgtcactcattgcggatcgtaagcgtgagaaggaaaaacgg
cgagacaagcgagatcactatgatcacgagcgtgaatcgagaaccaacgaaagggatcta
atgccgcgcgatcgtagtgaaagagatctaagctcggtatcgaattcaagcaacgagcaa
caacacagcagcagtagacgtagccaggacccaccggaacatgatagagaaatgaaacgt
cgcaagcttgaaggatccagctcaaagaacaagcacgatgatggtaccggctccaaccaa
cagctactatcggagtcgaaaaaggaacgcagcagcaagacgaaggaaaagcgtgacaag
actgacgaagaaaaggaactgcgcaaggagcgtaagctcggtcgcaagcggcaggatcgc
aatccggacgaatcgttactgacggacaagcggttacgtcgagaggaggaaaaggcccag
aagctgctgtcacaccaaaacggcgacaatgacggtgaccttccgcccatgtccgtgtcg
tcgtcgcaccgggaaaaacatcaccatcaccatttgaaggaaaaatctccatcgtacggt
ggcggcggtggtggtagcgtactgcgggatcaccgcgaacgttcacacgaccggggattg
gatcgcggagagaaacagtactttacgaaaacgtcccgcacacgctcgggctattaa

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