Anopheles nili: 128725925
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Entry
128725925 CDS
T11473
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
anil Anopheles nili
Pathway
anil04382
Cornified envelope formation
anil04512
ECM-receptor interaction
anil04518
Integrin signaling
anil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
anil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
128725925
04518 Integrin signaling
128725925
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
128725925
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
128725925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anil04147
]
128725925
00536 Glycosaminoglycan binding proteins [BR:
anil00536
]
128725925
Exosome [BR:
anil04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
128725925
Glycosaminoglycan binding proteins [BR:
anil00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
128725925
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
128725925
NCBI-ProteinID:
XP_053675674
LinkDB
All DBs
Position
3:complement(6386727..6395510)
Genome browser
AA seq
1775 aa
AA seq
DB search
MGTRLKWLITTSLIVWFGQHAYAQFWSDQSNGVGLFNRPEQDHPRQLPQNIDPSYSLIDT
ASGPQGPPAKNCTSGGCCTPKCFAEKGSRGMPGPQGLKGAKGVRGFPGSEGLPGEKGTKG
EPGPVGLQGPKGDRGRDGLPGYPGIPGTNGVPGTTGAPGLPGRDGCNGTDGVPGLSGLAG
NPGPRGYAGMPGSKGEKGEPARHPENYNKGQKGEPGNDGLEGLPGPQGEVGPRGFSGRIG
EKGIPGMHGPKGERGDKGECVKGAKGEKGPKGEEMYGATGTPTTTTGPKGEKGDRGEPGE
PGRAGEKGQAGDRGQVGERGHKGEKGLPGQPGPRGRDGNFGPVGLPGQKGDRGSEGLHGL
KGQIGPKGDAGRDGFPGQPGIAGPPGAPGGGEGRPGAPGPKGPRGYEGPPGPKGMDGFDG
EKGERGQMGPKGGQGVPGRPGPEGMPGDKGDKGESGSVGMPGPQGPRGYPGQQGLEGLRG
EPGQPGYGAPGMKGNAGMAGFPGLKGQKGERGFKGMMGTPGDAKEGRPGSPGMPGRDGEK
GEAGRPGLPGAKGERGLKGELGGRCTDCRPGLKGDKGERGKDGESGRPGASGIPGERGYP
GVMGEDGTPGLRGEPGQKGEPGLLGPPGPSGEPGRDAEIPMDQLKPLKGDKGETGERGLM
GIKGEKGFAGPVGPEGKVGLRGMKGDKGRPGESGIDGAPGAPGKDGLPGRHGQTLKGEAG
LKGNVGYQGEKGDKGFGGLKGEPGRCASIPPNLEEAIRGPPGAPGEKGAPGMQGIRGDKG
ETGELGRTGMPGNAGPPGAAGPVGPRGLTGQRGEKGNTGALGPPGAPGRDGLAGAPGLPG
SKGAKGDPGLSMVGPPGPKGNTGLRGPKGERGGLGERGDAGLPGSVGYPGEKGDAGIAGQ
PGFPGEVGPKGEPGPKGPAGHPGAPGRPGMDGVKGLRGLKGDIGAPGVIGLPGQKGETGQ
AGNDGLKGFQGRKGMMGAPGIQGLPGPQGTKGEQGEKGDRGEIGMKGMVGPGGPPGMLGP
KGDKGLAGLPGPACLPGLSGEKGDKGYSGPEGPPGEPGAASEKGQKGEPGVPGLRGNDGL
PGLEGPTGPKGDAGVPGYGRPGPQGEKGDVGVTGINGLAGLNGVKGDMGVPGFPGVKGDK
GGTGLPGVPGAPCMDGLPGLEGPPGPRGYDGEKGFKGEPGRIGERGERGEKGDAGLTGPV
GLMGLKGDRGVPGAPGLSASVSAIKGEKGEPGFPGAIGRPGKVGAPGLPGDVGPKGETGV
QGLPGLPGPAGLNGLVGMKGDMGLLGEKGDSCPVVKGEKGLPGRPGKTGRDGPLGMVGEK
GDKGLSGLPGPMGPPGPPGPLGRQGEKGDRGDSGLVGRPGKDGFPGAPGLRGLAGLQGEK
GDQGPPGFLGPKGDKGERGRDGVNGLNGPQGLKGERGMPGQEGVAGLPGMVGEKGERGLS
GMAGLNGAPGEKGQKGETPALPPQRKGPPGPPGFNGPKGDKGAPGLAGPAGIPGAPGAPG
EMGLRGFEGARGLQGLRGDVGPEGRPGRDGAPGLPGPKGEAGRDCEAAPYYTGILLVRHS
QSDEVPMCEPGHLKLWDGYSLLYVDGNDFPHNQDLGSAGSCVRKFSTLPVMSCGQNNVCG
YATRNDRTYWLSTSAPIPMMPVAENEMRPYISRCTVCEAPTNVIAVHSQTLHIPECPSGW
DGLWIGYSFLMHTAVGHGGGGQSLSGAGSCLEDFRATPFIECNGVKGHCHYYETQTSLWL
VSLEDHQQFQRPEQQTLKAGNLLSRVSRCQVCIRR
NT seq
5328 nt
NT seq
+upstream
nt +downstream
nt
atgggaacccgattaaaatggttaatcactacctcgttgatagtttggtttgggcaacat
gcgtacgcgcaattctggtcagaccagtcaaatggtgtggggttgtttaaccgccccgaa
caggatcatccccgccagctgccacaaaacatcgatcccagttacagtctaatcgacacc
gccagtggaccacaaggacctccggcgaagaactgcacctccgggggttgctgcacaccg
aaatgtttcgcggaaaagggctctcggggtatgccgggcccgcaggggttgaagggtgcc
aagggtgtgcgtggattccccggttcggagggtttgcccggtgagaaaggcacgaaaggt
gaaccgggaccggtgggactgcagggtccgaagggtgaccgtggaagagacggattgccc
ggttatcctggcatccctggaacgaatggagtccccggaacgacgggcgcgcccggattg
ccgggacgggacggttgcaacggaacggacggtgtgccggggttgtccgggttggcggga
aatccaggaccacgtggatacgccggtatgccgggttcgaagggcgagaagggtgaaccg
gcacggcatccggagaactacaacaagggccagaagggtgaaccgggtaacgatgggttg
gagggtttgccggggccgcagggtgaggtgggaccgcgaggattctcgggaaggattggt
gaaaagggcattcctggtatgcatggtccgaagggcgaacgcggcgacaagggtgagtgt
gtgaagggcgccaagggtgagaagggtccgaagggtgaggagatgtacggtgcgacgggt
acgccaacgacaacgactggaccgaagggcgagaagggtgaccgcggtgaaccgggagag
ccgggtcgtgcgggggagaagggccaagcgggtgaccgaggacaagtgggtgagcggggt
cacaagggcgagaagggcttgcctggacagccgggaccaagagggcgtgatggaaacttc
ggaccggtgggactgccaggacaaaaaggagaccgcggatcggagggcctgcacgggctg
aagggccaaatcggaccgaagggcgacgcaggacgagacggattcccgggtcagccaggt
attgcaggacctccaggagctcccggaggtggtgaaggacgacctggtgcacctggaccg
aagggaccgcgtggttacgagggcccgcccggaccaaagggcatggacggattcgacggt
gagaaaggcgaacgtggacagatgggcccgaagggcggtcaaggagtcccaggacgaccg
ggtccggaaggtatgccaggagacaagggcgataagggtgaatccggatcggttggaatg
ccaggcccgcaaggacctcgcggatacccaggccagcaaggactcgagggactgcgaggt
gaaccgggacaacccggctatggagcaccaggaatgaagggtaacgccggcatggcagga
ttccccggactgaagggccaaaagggagagcgcggtttcaagggcatgatgggaacgccc
ggtgacgccaaggaaggccgaccaggatcccccggtatgccgggacgcgacggtgagaag
ggtgaagcgggccgaccaggactaccgggagcgaagggcgaacgtggtctgaagggcgag
ctgggcggacgctgtacggattgccgaccagggctgaagggcgacaagggtgaacgtgga
aaggacggtgaatcgggacgaccgggtgcgagcggtatacctggcgagcggggttacccg
ggtgtgatgggtgaggacggtacaccggggttgcgcggagaaccaggtcaaaagggtgag
ccaggattgctaggaccgccgggtccttccggtgaaccgggacgcgatgccgagattccg
atggatcaactgaaacccctgaaaggcgataagggcgagacgggtgagcgtgggttgatg
ggcattaagggcgagaaaggctttgcgggacccgtcggacctgagggcaaggtggggttg
cgtggcatgaagggtgacaagggccggccaggagagtcaggcatcgatggagcaccagga
gcaccaggaaaagatgggctaccgggacgtcacggccagacgctgaagggtgaagcgggt
ctgaagggtaacgtcgggtatcagggtgaaaagggcgacaagggcttcggagggttgaag
ggcgaaccgggacgatgcgccagcattccacccaacctggaggaggcaatccgtggacca
ccgggggcaccgggtgagaagggcgcaccgggcatgcagggtatccgtggggacaagggc
gagacgggtgagctgggacgcacgggtatgccgggtaatgcgggaccaccgggagcagct
gggccagtggggccacgtggtttgacgggccaaaggggtgagaagggtaacacgggagcg
ttgggacctccaggagcaccgggacgcgatgggttggcgggggcacccggacttccagga
tcgaagggagcgaagggtgatccgggcctgtcgatggtgggaccaccgggaccgaagggt
aacacggggttgcggggaccgaagggtgaacggggtggattgggtgagcggggtgacgca
ggattgcccggttcggtgggctatccgggtgagaagggtgacgcgggcattgcaggacag
ccaggattcccgggcgaggtaggaccgaagggtgaaccaggaccgaagggaccggcgggg
catccgggagcaccaggacgaccgggaatggacggagtgaaggggttgcgagggttgaag
ggtgacattggggcaccgggcgtgattggactcccgggacagaagggcgaaacgggacag
gcaggtaacgatgggttgaagggcttccagggacgtaagggtatgatgggagcaccggga
atccaaggactaccaggaccccagggtacgaagggcgaacaaggtgagaagggtgatcgg
ggtgagatcggaatgaagggcatggtaggtccgggaggacctcctggaatgctaggaccg
aagggtgacaaaggacttgcggggcttccaggaccagcttgcctccccggactgtcgggt
gagaagggcgacaagggttactcgggaccggaaggacctccgggagagccaggtgccgcc
tcggagaagggccaaaagggcgaaccgggtgtaccgggattgcgcggaaacgacgggctt
cccgggttggagggtccaacagggccgaagggagacgccggagtgcccggatacggacga
cccggaccacagggtgagaagggagatgtgggagtgacgggcataaacggactcgcagga
ttgaatggcgttaagggcgatatgggcgtgcccgggttcccgggtgtgaagggtgacaag
ggaggcaccggtcttcccggtgtccctggagcaccttgcatggatggattgccggggctg
gaaggacctccaggaccacgaggatacgatggcgagaagggctttaagggcgaaccggga
cgcatcggtgagcggggtgaacgtggagagaagggtgacgctggacttaccggtcccgtc
ggtttgatgggcctgaagggagaccggggtgtgccaggtgctcctggcctttcggcgtcg
gtgtccgcgataaagggcgaaaagggtgaaccaggtttcccgggagcaatcggacgtcct
ggaaaagtcggtgcacctggtctgcccggggacgtgggtccgaagggtgaaacgggtgtt
cagggacttccgggattgcctggaccggccggattgaacgggttggtgggcatgaagggt
gacatgggcttgctgggagagaagggtgactcctgtccggtggtgaagggcgagaagggt
ctcccaggacgaccgggtaagacgggacgcgatggaccactgggaatggtgggagagaag
ggtgacaaggggttgtcagggctccccggaccaatgggacctccgggacctccgggtccg
ttgggacggcagggtgagaagggtgatcgtggtgattccgggttggtgggacgcccgggt
aaggatgggttcccgggggcaccgggattgcgggggttggcgggactgcagggtgagaag
ggcgaccaaggtccacccgggttccttggccccaagggtgataagggcgagcgcggaagg
gacggagtgaacggattgaacggaccgcaagggttgaagggcgaacgaggcatgccagga
caggagggtgtggccgggctaccgggaatggtgggtgagaagggcgagcgaggtttgtcg
ggaatggccgggttgaacggtgcaccgggtgagaagggacagaagggtgaaacacctgct
cttccaccgcaacgcaagggtccaccaggacctccgggtttcaatggaccgaagggagat
aagggggcaccgggattggcgggaccggcgggaattccaggcgcaccaggagcaccaggt
gagatgggtctgcggggcttcgaaggtgcccgaggactacaaggactacggggagacgtt
ggacctgagggacgaccgggtagagacggggcaccaggtctaccgggaccaaagggtgag
gcaggacgggactgtgaggcagctccgtactacaccggcatcctgcttgtccgccacagc
cagtccgatgaggtgccaatgtgtgaacctggccatctgaagctctgggacggctattcg
ctgctgtacgtcgatggcaacgacttcccacacaatcaagacctcggatcggctggttcg
tgtgtgcgcaagttctccacacttccggtgatgagctgtggccagaacaatgtgtgtggg
tatgcaacacgcaacgaccgaacgtactggttgtcgacgtcggcacctattccgatgatg
ccggtggccgagaacgagatgcgaccgtacatctctcggtgcacggtttgtgaagctccg
acaaatgtcatcgccgtacacagccagacgctccacattccggaatgtccgtctgggtgg
gatggtctctggatcggctacagtttcctcatgcacactgccgtcggccatggtggaggt
ggtcagtctctgtccggtgcaggatcgtgtcttgaggacttccgtgccacaccgttcatt
gagtgtaacggtgttaagggtcactgccactactacgaaacgcaaacctccctctggctg
gtgtcactcgaggaccaccagcagttccaacgacccgagcagcaaacgctcaaggccggc
aacctgctcagccgggtatctcggtgccaggtgtgcatccgccgctga
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