Anopheles nili: 128730823
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Entry
128730823 CDS
T11473
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
anil
Anopheles nili
Pathway
anil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128730823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anil03041
]
128730823
Enzymes [BR:
anil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
128730823
Spliceosome [BR:
anil03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
128730823
Complex B
128730823
Complex C
U2 SnRNP specific factors
128730823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
128730823
NCBI-ProteinID:
XP_053679879
LinkDB
All DBs
Position
2:48498454..48501189
Genome browser
AA seq
794 aa
AA seq
DB search
MNRNRGNFSFQMRRNHRPVQQNQQNQKDQTRSYSLNAVPPPSSLCGRSTGVPPPKSYNQG
SGISKHGYHTIESMHQYSNASQYSVGKRRGRTEDEYFDEDDEQSGQPLEYIPAPGSPTAT
DDEKKDSSNDEDEEDPLDAFMAGIEEQVKMENKKIPQPSVDPKKGTRGDIDDEDDEESYY
RYMQENPHAGVIDEGSDAELEYDEDGNPIPPPRRRDIDPLPAIDHSDISYAKFEKNFYIP
HEDIVSLTQAKVQDLRQTIGVKVSGPLPPHPVTSFAHFGFDESLMKSIRKSDYTQPTPIQ
AQAIPAALSGRDIIGIAKTGSGKTAAFLWPMLVHIMDQSELGSGDGPIGLILAPTRELSL
QIYTEAKKFGKVYNISVCCCYGGGSKWEQSKALEQGAEIVVATPGRMIDMVKMKATNLQR
VTYLVLDEADKMFNMGFEPQVRSICNHIRPDRQTLLFSATFKKRVEKLARDVLTDPVRII
HGDLGEANADVTQRIILLPNVQAKWNWLLSNLVQILSEGSVLVFVTKKADAEQVATSLRL
KENDVVLLHGDMDQSERNSVITRFKRKDVDIMVATDVAARGLDIPHIRTVINYDIARDID
THTHRIGRTGRAGEKGTAYTLITEKDKEFSGHLVRNLEGANQEVPEDLMKLAMQSSWFRN
SRFKQTNKGKNLNVGGAGLGFRQRTIHRGPMSRSSDTSCNPGTDGELGPAPGSSKGPATD
RLSAMRETFRSHYNAQFKASSDRTWENTVPEGGVFVKPTLPGLETVCGVDSHEQPQFDVD
SIDSVPRKKKSRWN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaacagaaatcgaggcaactttagctttcagatgcgtcgtaatcatcgtcctgtgcag
cagaatcaacaaaatcagaaggatcaaactcgtagttattcgcttaatgctgttcctcca
ccaagttcactatgcggtagatcaactggtgtaccaccgcccaagtcttataatcaagga
tctggcatatctaaacatggttaccacacgatagaatccatgcaccagtattccaatgca
tctcaatattctgttggaaaacgtcgcggacgaaccgaagacgaatattttgatgaagat
gatgaacaatctggacaaccgttggaatatatacctgcacctggctctccaaccgcaact
gacgacgaaaagaaagactcatcaaatgacgaggacgaagaagatcccttggatgcattt
atggctggcatcgaagaacaggtaaagatggagaataaaaaaattcctcagcctagcgtt
gatccgaaaaaaggtactcgcggagacattgatgatgaagatgacgaggagagttattat
cgatatatgcaagaaaatccacacgcaggagtaattgatgaagggtccgatgcagaactg
gagtacgacgaggatggcaatccgatacctccaccaagacggcgtgacatcgatccacta
cccgctatcgatcactcggacataagctatgcgaagtttgaaaaaaatttctacattcct
catgaggacatcgtatcactaactcaagcgaaagtgcaagatcttcgtcaaacaatcggt
gttaaagttagtggacctctgcctcctcatccggttacaagtttcgcgcattttgggttc
gatgaatctttgatgaaatcaatacgcaaatcagattacacccagccaacaccgatccaa
gcacaagctattcctgcagcgcttagtggacgtgatattataggtatagctaaaaccggt
agcggaaaaacagctgccttcctttggccgatgttagttcatatcatggaccaatcagaa
ctgggttcaggtgatggtcctattgggctaattttggcaccgacgcgagaactttcgctc
caaatctatactgaagcaaaaaaattcggcaaagtatacaacataagcgtttgttgctgc
tatggcggtggttcgaagtgggagcagagcaaggcgctcgaacagggtgctgaaattgta
gtggctacacctgggcgcatgattgatatggtgaaaatgaaagcaacaaacctgcaacgt
gttacatatctggtattggacgaagcggataaaatgttcaacatgggatttgaaccacag
gtccgttcgatttgcaatcacattcgtcctgatcggcagactctattgtttagtgctaca
tttaagaagcgagtggaaaagcttgctcgtgacgttttaacagatccagtgcgcatcata
catggcgatttaggagaagccaatgcagatgtaactcaacgtattatattgttgccaaat
gtccaggccaaatggaattggttgctatcaaacctcgtgcagattctttcggaaggaagt
gtactggtgttcgtaacgaaaaaggctgatgccgaacaagtagctaccagtctacgactt
aaagaaaacgacgtcgtcttgttgcacggcgatatggatcaatcagagaggaattcagta
atcactcgatttaaacgaaaggatgttgatattatggtagccacagacgtagctgcccgt
ggtcttgatatacctcatatacgcactgtgattaattacgacattgctcgggatatcgat
acccacacacatcgtattggtcgaaccggccgtgctggagaaaagggcacagcatataca
ttgattacagaaaaagacaaggaattttctggacatttggtacgtaatcttgaaggtgcg
aatcaagaagtacctgaggatctcatgaaactagcaatgcaaagctcttggttccgaaac
agtcgctttaaacaaaccaacaaaggtaagaatttgaacgttggtggggcgggattaggt
tttcgtcagcgaacaatccatcgcggtccaatgagcagatcttcagatacctcgtgtaat
cctgggacagatggtgaattaggaccggctccagggtcgtctaaaggtccggcaactgat
cgattatctgctatgcgggaaactttccgatcccattacaacgcacagtttaaagcatcc
agtgatcgaacttgggaaaacactgtaccagaaggcggtgtgtttgtaaaaccaacttta
cccggcctagaaacggtgtgtggggtagattctcacgaacaaccacaattcgacgtcgat
agcattgattctgttccacgaaagaaaaagagcaggtggaattag
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