Aminobacter niigataensis: AMD1_0236
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Entry
AMD1_0236 CDS
T09606
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anj03032
]
AMD1_0236 (ihfB)
03036 Chromosome and associated proteins [BR:
anj03036
]
AMD1_0236 (ihfB)
03400 DNA repair and recombination proteins [BR:
anj03400
]
AMD1_0236 (ihfB)
DNA replication proteins [BR:
anj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AMD1_0236 (ihfB)
Chromosome and associated proteins [BR:
anj03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AMD1_0236 (ihfB)
DNA repair and recombination proteins [BR:
anj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AMD1_0236 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
CAI2931524
LinkDB
All DBs
Position
AMD1:226215..226499
Genome browser
AA seq
94 aa
AA seq
DB search
MIKSELVQIIATRNPHLFLRDVENIVSAIFDEITDALADGNRVELRGFGAFSVKNRPART
GRNPRTGESVEVEEKWVPFFKTGKELRERLNSAK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtctgaactggtgcaaatcattgcgacacgcaatccgcatcttttcctgcgg
gatgtcgagaacatcgtcagcgccatcttcgacgaaatcaccgatgcgctggccgacggc
aaccgtgtcgaactgcgcggcttcggcgcattctcggtcaagaaccgtccggcccgcacc
ggccgcaacccgcgcaccggcgaatccgtcgaggtcgaggaaaagtgggtgccgttcttc
aagaccggcaaggagctgcgcgagcggctgaactccgcgaaatag
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