Aminobacter niigataensis: AMD1_0268
Help
Entry
AMD1_0268 CDS
T09606
Name
(GenBank) Ribonuclease D related protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anj03016
]
AMD1_0268
Enzymes [BR:
anj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AMD1_0268
Transfer RNA biogenesis [BR:
anj03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AMD1_0268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
CAI2931556
LinkDB
All DBs
Position
AMD1:complement(252749..253366)
Genome browser
AA seq
205 aa
AA seq
DB search
MTIRFHKHDLPDLTHYDVDAVAIDTETLGLNPHRDRLCVVQISPGDGTADVIQIAPGQKK
APNLTSLLRNRKVTKLFHFGRFDIAVLYNAFGVMAEPVFCTKIASRLTRTYTDRHGLKDI
CNELLGVSLSKQQQSSDWAAETLSPEQLEYAASDVLYLHRLRDVLAGRLERDGRTKEAEA
CFRFLPVRAKLDLMGWDEEDIFAHS
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccgctttcacaagcacgacctgcccgacctcacgcactacgacgtcgatgcg
gtcgccatcgacaccgagacgctggggctgaacccgcatcgcgaccggctctgcgtcgtc
cagatctcgccgggcgacggcaccgccgacgtgatccagatcgcgcccgggcagaagaag
gcgccgaacctgacgagcctgctcaggaaccgcaaggtgaccaagctgttccatttcggc
cgcttcgacatcgccgtgctctacaacgccttcggcgtcatggccgagccggtgttctgc
accaagatcgcctcgcgcctgacccgcacctacaccgaccgccacggcctcaaggacatc
tgcaacgagcttctcggcgtcagcctgtcgaagcagcagcagtcgtcggactgggcagcc
gagacgttgtcgcccgagcagctcgaatatgccgcatccgacgtgctttacctgcatcgg
ctgcgcgacgtgctggccggcaggttggagcgcgacggccgcaccaaggaggccgaggcc
tgcttccgcttcctgcccgtccgggcgaagctcgacctgatgggctgggacgaagaggac
attttcgcccatagctga
DBGET
integrated database retrieval system
