Aminobacter niigataensis: AMD1_0513
Help
Entry
AMD1_0513 CDS
T09606
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00061
Fatty acid biosynthesis
anj00071
Fatty acid degradation
anj01100
Metabolic pathways
anj01212
Fatty acid metabolism
anj02024
Quorum sensing
anj04146
Peroxisome
Module
anj_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
AMD1_0513
00071 Fatty acid degradation
AMD1_0513
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
AMD1_0513
09145 Cellular community - prokaryotes
02024 Quorum sensing
AMD1_0513
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
anj01004
]
AMD1_0513
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anj04147
]
AMD1_0513
Enzymes [BR:
anj01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
AMD1_0513
Lipid biosynthesis proteins [BR:
anj01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
AMD1_0513
Exosome [BR:
anj04147
]
Exosomal proteins
Exosomal proteins of breast milk
AMD1_0513
Exosomal proteins of breast cancer cells
AMD1_0513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
CAI2931801
LinkDB
All DBs
Position
AMD1:complement(516013..517986)
Genome browser
AA seq
657 aa
AA seq
DB search
MAQGSVTRELDTFAKLLCEHARLRPNRPAMRHKDLGIWRTWDWSELAQTIRAYAAGLQQL
GLERGATIAVIGANRPAMYWTILAAQWLGAIPVPVYADAVADEMAYVLDHADVAFAAVQD
QEQVDKLISVQDRVPKLRTVLYDEPRGLRDYDHSRLHAIHDIIEQGRVRLAADGSAAAAI
DTERDRGQASDISIILYTSGTTGRSKGVLLTAGGSIAAARDTVTFDKLTDRDEVLAYLPL
AWVGDHYLNYAQSMVAGFCVACPESRETAEADTQEIGPSFYFAPPRVFETLLTRITIRME
DAGALKRGMFNYFIGVARRWGEKILDGETVPLGARLGYAIGNLLVYAPLKNVLGFSRIRV
AYTAGEAIGPDLFSFYRSLGLNLKQLYGQTEAFLYVTAQPDGQIRAGTVGPATPNVEIRI
ADDGEVLYRSPGQFVGYYKDAERTAETVTPEGYVKTGDAGFFDPDGHLTIIDRAKDVGKL
SSGALFAPKYIENKLKFFPNIKEAVAFGQDRDFVTVMLNIDLTAVGNWAERKNIAYGSYQ
ELAQRPEVYEMFTGHVAEVNRALAAEPRMAAAQIKRFLILHKELDADDGEMTRTQKVRRG
FIAERYKPLVDALYNGSEASDISTEVTFEDGRKGIISARVRIAEAEVAQVAKLGVAA
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
ttggcacaagggagcgtaacgcgcgagctcgatacgtttgccaagctgctttgcgagcat
gctcgcctgcggcccaatcgcccggcgatgcgtcacaaggatctcggcatctggcggaca
tgggactggagcgagctggcccaaaccatccgcgcctatgccgccggcttgcagcaactc
ggcctggagcgcggcgcgaccatcgccgtcatcggcgcgaaccggccggccatgtactgg
accattctcgccgcgcaatggctgggggcgatccccgtgccggtctatgccgatgcggtc
gcggacgagatggcctatgtgctcgaccacgccgacgtcgcctttgcggcggtgcaggat
caggagcaggtcgacaagctgatctcggtccaggaccgcgtgcccaagctccgcaccgtt
ctctatgacgagccgcgcggcttgcgcgactacgatcacagccggctccacgccatccat
gacatcatcgagcaggggcgtgtccgactggcggctgacggctcggcggccgctgcgatt
gataccgagcgcgaccgtggtcaggccagcgacatctccatcatcctgtatacctccggc
acgacaggccgatccaagggggtgctgctgaccgccggcggctcgatcgcggcggcgcgc
gataccgtcaccttcgacaagctcaccgaccgcgacgaagtgctcgcctacctgccgctg
gcctgggtcggcgatcactacctcaactatgcccagtctatggtcgcgggcttctgcgtc
gcttgtcccgaaagccgggaaacggcggaagccgacacgcaagagatcgggccgagcttc
tatttcgcgccgccgcgcgtgttcgagacgctgctgacccggatcaccatccgcatggag
gatgccggagcgctcaagcgcggcatgttcaattacttcatcggcgtagccaggcgttgg
ggtgaaaagatcctcgacggcgagaccgtgccgcttggcgcccgcctcggctacgcgatc
gggaacctgctggtttacgcaccgctgaagaacgtgctcggcttttcccgcattcgcgtc
gcctacacggccggcgaggcaatcggacccgacctgttttccttctaccggtcgctcggc
ctcaacctgaagcagctctacggccagacagaggcctttctctatgtcaccgcgcagcct
gacgggcagatccgcgccggcacggttgggccggcgacgcccaatgtcgagatccgcatc
gccgacgatggcgaggtgctctatcgctcacccggccagttcgtcggctattacaaggac
gctgaacgcacggcagaaacggtcaccccggaaggttacgtgaagacaggcgacgccggc
ttcttcgatcccgacggccacctcaccatcatcgaccgcgccaaggatgtcggcaagctg
agctcaggcgcgctgttcgcgccgaaatacatcgaaaacaagctgaaattcttccccaac
atcaaggaagccgttgccttcggccaggaccgcgacttcgtcacggtcatgctcaacatc
gacctgacggcggtcggcaactgggcggaacgcaagaacatcgcctacggctcctaccag
gagctggcgcagcgccccgaggtctatgaaatgttcaccggtcacgtcgccgaggtgaac
cgggcactggccgccgagccgcgcatggcggcggcccagatcaagcgcttccttatcctg
cacaaggaactcgacgccgacgacggcgagatgacgcgcacgcagaaggtgcggcgcggc
ttcatcgccgaacgctacaagcctctggtcgacgcgctctacaatggctcggaggcctcc
gacatctcgaccgaagtgaccttcgaggacggccgcaagggtatcatatccgccagggtc
cgcatcgccgaggctgaggttgcgcaagtcgccaagcttggggtcgccgcatga
DBGET
integrated database retrieval system
