Aminobacter niigataensis: AMD1_0539
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Entry
AMD1_0539 CDS
T09606
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
anj
Aminobacter niigataensis
Pathway
anj00260
Glycine, serine and threonine metabolism
anj00460
Cyanoamino acid metabolism
anj00630
Glyoxylate and dicarboxylate metabolism
anj00670
One carbon pool by folate
anj00680
Methane metabolism
anj01100
Metabolic pathways
anj01110
Biosynthesis of secondary metabolites
anj01120
Microbial metabolism in diverse environments
anj01200
Carbon metabolism
anj01230
Biosynthesis of amino acids
anj01240
Biosynthesis of cofactors
anj04981
Folate transport and metabolism
Module
anj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AMD1_0539 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AMD1_0539 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AMD1_0539 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AMD1_0539 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AMD1_0539 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AMD1_0539 (glyA)
Enzymes [BR:
anj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AMD1_0539 (glyA)
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GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
CAI2931827
LinkDB
All DBs
Position
AMD1:complement(540926..542248)
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AA seq
440 aa
AA seq
DB search
MSGIENLWDHPAEGDMFRRALAEADPRIFTLSQLECRRQSEQIELIASENIVSRAVLQAQ
GTALTNKYAEGYPERRYYGGCEFVDEIESEAIERAKKLFGARFANVQPHSGAQANGAVKL
ALLNPGDTILGMSLDAGGHLTHGARPAMSGKWFRAAQYGVRQVDGRIDYEQVAELADRER
PRMIIAGASAYSRVIDFARFREIAESVGAWLLVDMAHIAGLVATGHHPSPLDHAHVVTST
THKTLRGPRGGLILTNDEAMAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRLDFSKYI
QRVVESARVLAEVISERGCKIISGGTDNHLMLVDLRPKGLTGNVAEASLERAGFTCNKNG
VPGDPEKPTVTSGIRLGTSAGCSRGFAPEEFREIGHLISDVLDALASDPHRLPSVEAATR
EKVAALCRQFPIYPVGEGER
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
ttgtctggaattgaaaacttgtgggaccaccctgcagagggtgacatgttcaggcgagcg
ttagcggaggcggatcctcgtatatttacgctctcgcagctggagtgtcgccggcagtcc
gagcagatcgagttgatcgcttcggaaaacatcgtgtcccgcgcggttcttcaagcccaa
ggaacagcgctgacgaacaagtacgccgaaggttatccggagcgccgctattatggcggt
tgcgaatttgtcgatgagatcgaaagcgaggctatcgagcgggcaaaaaagctgtttgga
gcgcgtttcgccaacgtgcagccgcattcgggtgcacaggcaaacggcgccgtgaagctg
gccctgctgaatccgggtgacaccatacttggcatgtcactcgatgccggcggccacctg
acccacggtgctcggccagcaatgtcagggaaatggtttcgcgccgcccagtatggagtc
cgccaggtggatgggcggatcgactacgagcaggtggctgaattggccgatcgtgaaagg
ccgcgaatgattatcgcgggtgcctcggcctattctcgagtgatcgacttcgcccgtttc
agggaaatcgcggagtctgttggcgcctggctgttggtcgacatggcgcatatagctggt
cttgtcgccacaggtcaccacccatctccgcttgaccacgcccatgtcgtcacctcgaca
actcacaagactttgcgcggcccccgtggcggcctgatccttaccaacgacgaggcgatg
gctaagaagatcaactccgcagtgtttcccggcctacaaggggggccgctgatgcatgta
atcgccgctaaagcggtcgccttcggcgaggcgctgagactggatttttccaagtatatt
caacgggtggtggagagtgcgcgagtgctggcggaagtcatcagcgaacgcggctgcaaa
ataatctccggcggtacggataatcacctgatgctagtcgacctgcggcccaagggattg
acaggaaatgtggccgaggcgtcgctcgaacgcgccggctttacatgcaacaagaacggc
gttcctggtgatcccgaaaagccaactgttacgtccggaatccgacttggcacctcggcc
ggctgcagcaggggcttcgcacccgaggagtttcgggagatcggccatctgattagcgat
gtactcgacgctctggcgagcgatccacaccggctcccatcggtcgaggcggcgacccgc
gaaaaggtcgcggcattatgtcggcagttcccgatctatccagttggggagggggagcga
tga
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