Aminobacter niigataensis: AMD1_0823
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Entry
AMD1_0823 CDS
T09606
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
anj
Aminobacter niigataensis
Pathway
anj03030
DNA replication
anj03430
Mismatch repair
anj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMD1_0823 (dnaQ)
03430 Mismatch repair
AMD1_0823 (dnaQ)
03440 Homologous recombination
AMD1_0823 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anj03032
]
AMD1_0823 (dnaQ)
03400 DNA repair and recombination proteins [BR:
anj03400
]
AMD1_0823 (dnaQ)
Enzymes [BR:
anj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMD1_0823 (dnaQ)
DNA replication proteins [BR:
anj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMD1_0823 (dnaQ)
DNA repair and recombination proteins [BR:
anj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMD1_0823 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAI2932105
LinkDB
All DBs
Position
AMD1:complement(808477..809193)
Genome browser
AA seq
238 aa
AA seq
DB search
MREIIFDTETTGLDNREDRVIEIGGIEMVNRFPTGRTFHKYINPQGRQVHPEAQAVHGIS
NADLEGKPTFAEIIDDFIDFIDGAKLVAHNGTFDLGFINAEFARLDQAAIEAERLIDTLA
LARRKHPMGPNSLDALCRRYGIDNSRRTKHGALLDSELLAEVYIELIGGKQSALVLDSFS
SSGGNGGSTRQIEIVIAARPEPLPTRLSEAELAAHEKLVGTLGEKAIWAKLLSPTEPN
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgagatcattttcgatacggaaacgaccggcctcgacaatcgcgaggaccgcgtg
atcgagatcggcggcatcgagatggtcaaccgctttccgaccggccgcaccttccacaaa
tacatcaacccgcaggggcggcaggtccatccggaagcccaggccgtgcacggcatctcc
aatgccgatctcgagggcaagccgaccttcgctgagatcatcgacgacttcatcgacttc
atcgacggcgccaagcttgtcgcgcacaacggcactttcgatctgggtttcatcaatgcc
gagtttgccaggctcgaccaggcggcgatcgaggccgagcgcctgatcgatacgctggcg
cttgcccgccgcaagcacccgatgggcccgaattcgctcgatgcgctgtgccggcgctac
ggcatcgacaacagccgccgtaccaagcacggcgccctgctcgactccgagctcctggcc
gaagtctatatcgagctgattggtggcaagcagtcggcgctggtgctggacagcttttcg
tcatccggtggtaatggcgggtcgacgcggcagatcgagatcgtcatcgccgcccggcct
gagccgctgccgacccggctgagcgaggccgagcttgccgcgcacgagaagctggtcggc
acccttggcgaaaaggcgatctgggcgaagctgctctctccgaccgagccaaactga
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