Aminobacter niigataensis: AMD1_0924
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Entry
AMD1_0924 CDS
T09606
Name
(GenBank) Methylase
KO
K26273
protein strawberry notch
Organism
anj
Aminobacter niigataensis
Brite
KEGG Orthology (KO) [BR:
anj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anj03036
]
AMD1_0924
Chromosome and associated proteins [BR:
anj03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
AMD1_0924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
MTS
AAA
Motif
Other DBs
NCBI-ProteinID:
CAI2932206
LinkDB
All DBs
Position
AMD1:907098..911405
Genome browser
AA seq
1435 aa
AA seq
DB search
MNIMSPVAVPAAPIVRASAIIAVAHRLLALLERGQRIGSADLRAAMETAFDASDATGAWD
WKTAYEACECATVLFLHKFGCALFNKADTTVARLSALSKITGLLPTHTRRSEESQALQQF
STPVPLGLAAIAAAAITPRDVVLEPSAGTGLLAILAKISGGSLLLNELAETRADLLSALF
PACPVTRVDAAQIDDHLPSSAIPSVILMNPPFSVMANVSGRVPDAASRHVASALARLADG
GRLVAITGANFGPEQPAWRDSFVRLQERGRVVFTAAIDGSLYARHGTTIETRLTVIDKLP
AEEPATFPASTGIAPDVATLLAWIEAEVPPRLPVALPESAPPMLGSAPRTVRGYLARATT
ARPAAPPSIDPEGVELAYDTVDWTPTEGVHLTDAIYEEYGLQSIRILGSQAHPTKLVQSA
AMASIAPPKPAYRPMLPMGITDLLSDAQLETVIYAGEAHSDFLAGTWMVDATFDLVQAVP
TDAENAVRFRRGFMLGDGTGTGKGRQSAGIILDNWLRDRRKAVWISKSDKLIEDAQRDWS
ALGMERLLVTPLSRFAQGKPITLSEGVLFATYATLRSDDRGEKVSRVRQIVEWLGSDFDG
VIIFDESHAMANAAGGKGERGDVAASQQGRAGLRLQHALPNARIVYVSATGATTVHNLAY
AQRLGLWGGEDFPFATRAEFVEAIEDGGVAAMEVLARDLRSLGLYTARSLSYDGVEYELV
EHALTDEQRGIYDAYAGAFAVIHNHLDAAMQAANITGDDGTLNRQAKSAARSAFESAKQR
FFGHLLTSMKTPTLIRSIKRDLEDGHVAVVQIVSTGEALMERRLAEIPTEEWNDVRVDIT
PREYVLDYLAHSFPVQLYEPFTDGEGNLSSRPVYRDGQPVDSREAVARRDELIERLASLP
PVPGALDQIVQRFGTDIVAEVTGRSRRIVRKGERLAVENRAPSANLAETAAFMDDLKRIL
VFSEAGGTGRSYHAELSAKNQRLRVHYLLEPGWKADAAIQGLGRTNRTNQAQPPLFRPIA
TNVKAEKRFLSTIARRLDTLGAITRGQRQTGGQGLFRPEDNLESSYARAALRQLYLLIVR
GKVDGCSLGRFESTTGLKLTDESGIKDELPAITTFLNRLLALTIELQGILFTAFEQLLDA
KVTGAIASGVYDVGLETLTAESLVVTERTTIYTHPATDAQTRLLAITERRRNRPTTLDTA
LGWLDDPHARLLVNARSGRAAVQVPAPSIMLDDGEIERRVRLIRPMEQHHATSAMMDDSH
WQEADRGTFAAIWQREVAEVPAYTEGMIHMVSGLLLPVWKRLPNESTRVYRLQTDDGERI
IGRRVSPAWAANAASTGTTNLTSDEAYAALVDGRTILDLADGLQLHRARVMGANRVELSG
FTEAMRDRLRAYGLFSEIISWKLRFFVPVDTSGPAILGKLLDTYPVERIGEREAA
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcatgtcacccgtggccgttccggctgcgcccatcgtacgtgcgtccgccatc
atcgccgtcgcccatcgacttctcgccttgctcgaacgcgggcaaaggatcggcagcgcc
gatctccgcgccgccatggagaccgctttcgacgcttccgacgcgaccggagcctgggac
tggaagacggcgtatgaagcctgcgaatgcgcgaccgtcctgtttctgcacaaattcgga
tgtgcgcttttcaataaagccgacactacggttgcacggctttccgccctgtcgaaaatc
accggcctcctgccgacgcacacccgtcgctccgaggagagccaggcgcttcagcaattc
tcgacgccggtcccgctcggcctcgccgccatcgccgccgccgcgatcaccccgcgcgat
gtcgtgctggagccctcggccggcacaggcctgctcgccatcctcgccaagatcagcggc
ggttcgttgctcctcaacgagctggcggaaactcgtgccgatctgctctccgcgctcttt
cccgcttgtcccgtcacgcgcgtcgatgctgcccagatcgacgatcacctcccgtccagc
gccattccttccgttatactgatgaacccgccattctcggtgatggcgaacgtctccggc
cgcgtgcccgacgccgcctctcgccatgtcgcctcggcgctggcgcggctcgccgacggc
gggcgtcttgtcgcgatcaccggcgcgaacttcggtcccgagcagcccgcatggcgcgac
tccttcgtgcggctgcaggagcgcggccgcgtcgtcttcaccgcggcgatcgacggctcg
ctctatgccaggcacggcacgaccatcgagacgcggctcaccgtcatcgacaagctgccc
gccgaagagccggccacgttcccggcttccactggtatcgcgcccgacgtcgccacgctg
ctcgcctggatcgaggcggaggttccaccgcgcctgccggtcgctctgcccgaatccgcg
ccacccatgttgggctcagcgccgcgcaccgtgcgcggctatctcgcgcgcgctaccaca
gcgcgtccggctgcaccgccgtccatcgaccctgaaggcgtcgaactcgcctatgacacc
gtggactggacgccgaccgagggcgtgcacctcacggacgcgatctatgaagaatacgga
ttgcagtcgatccgcattctcggctctcaggcgcacccgaccaagctggtgcaatcggcg
gccatggcgagcatcgcgccgcccaagcctgcctatcggccgatgctaccgatgggcatc
accgatttgctgtcggacgcccagctcgaaaccgtcatctatgccggcgaagcccattcg
gactttctcgccggaacgtggatggtcgatgcgaccttcgatcttgtccaggccgtgccg
accgacgccgagaatgccgtgcgtttccgccgcggcttcatgctcggcgacggcaccgga
acgggcaaaggccgtcaatctgccggcatcatcctcgacaactggctgcgcgatcgccgt
aaggctgtctggatctccaaatccgacaagctgatcgaggacgcgcaacgcgactggtcc
gcgctcggcatggagcgcctgctggtcacgccgctgtcgcgctttgcccagggcaagccg
atcacgctgtcggaaggcgtcctatttgcaacctacgccacgctgcgctccgacgaccgt
ggtgagaaggtttcgcgcgtccggcagatcgtcgaatggttgggctccgatttcgacgga
gtgatcattttcgacgagagccatgccatggccaatgccgcaggcggcaagggagaacgc
ggggacgttgccgcttcgcagcagggacgcgccggcctccggctccagcacgccctgccg
aacgcgcgcatcgtctatgtctccgccaccggcgcaaccaccgttcacaatctcgcttat
gcccagcggctcggcctgtggggcggcgaggattttcccttcgccacccgcgccgaattc
gtcgaagcgatcgaggacggcggtgttgctgccatggaggttctcgcccgcgaccttcgc
tcgctcggcctctataccgcgcgttcgctctcctatgatggcgtcgaatacgagctggtc
gagcacgcgctgaccgacgagcaacgcggcatctatgatgcctatgccggcgcgttcgca
gtcatccataaccatcttgatgccgcgatgcaggccgccaacatcaccggcgacgacggc
acgctgaaccggcaggccaaatccgccgcgcgctcggccttcgaatccgccaagcagcgc
ttcttcggccatctgctcacgtcgatgaagaccccgacgcttatccgctccatcaagcgc
gatctcgaggatggacacgtcgccgtcgtgcagatcgtctcgaccggcgaagcgctgatg
gaacgccgactggccgagatcccgaccgaggaatggaacgacgttcgcgtcgacatcacc
ccgcgcgaatatgtgctggactatctggcccattccttcccggtccagctctacgagccg
ttcaccgatggcgaaggcaatctgtcctcgcgcccggtctatcgcgacggccaacccgtc
gacagccgcgaagctgtcgcgcgccgcgacgagctgatcgaacgcctagcatcgctccca
ccagtccccggcgcgctcgaccagatcgtccagcgcttcggcaccgacatagtggccgag
gtgacgggccgctcccggcgcatcgtccgcaagggtgaacgcctcgccgtagagaaccgg
gcaccatcggcgaacctcgccgaaaccgccgccttcatggacgacctgaaacgcatcctc
gtgttcagcgaagcgggtggcacaggccgcagttatcacgccgagctgtcggcgaagaac
cagcgcctgcgggtgcattatctgctcgagccggggtggaaggccgatgccgccattcag
ggcctcggtcgcaccaaccgcaccaaccaggcacagccgccgctcttccgtcctatcgcc
acgaacgtaaaagccgaaaagcgcttcctgtccacgatcgcgcgccggctcgatacgctt
ggcgccatcacgcgcggccagcgccagaccggcggccaggggttatttcgtcccgaggac
aatctggaatcgagctacgcccgcgctgcgctgcgccagctctatctcctgatcgtgcgc
ggcaaggtcgatggctgctcgctggggcgcttcgagtccacgaccggcctcaagctgacg
gacgaaagtggcatcaaggatgagctgccggcgatcaccaccttcttgaaccgccttctg
gcgctcaccatcgagcttcagggcatcctcttcaccgccttcgagcaattgctcgacgcc
aaggtgaccggggccatcgccagcggcgtctatgatgtcgggctggaaacgctgacggcg
gagagcctcgtcgtcaccgagcgcacgaccatctacacccacccggcaacggacgcgcag
acgcggctgctcgccataaccgagcgtcgtcgaaatcggccgaccacactcgatacggcg
ctcggttggctcgacgatccgcatgctcggctgctcgtcaacgcgcgttcgggacgagct
gctgtccaggtgccagcgccatccatcatgctcgacgatggcgagatcgaacgccgcgtc
cggctgatccgccctatggaacaacatcacgcgaccagcgccatgatggacgacagccat
tggcaggaggcggatcgcggcacgttcgcggccatctggcagcgcgaagtcgccgaggtg
ccagcttacaccgagggcatgatccacatggtcagcggtttgctcctgcccgtgtggaag
cgtctgccgaacgagtcgacgcgcgtctatcggctccagaccgacgatggcgagcgcatc
atcgggcggcgggtttcgcccgcctgggccgcgaacgccgcctctaccggcacgaccaat
ctcaccagcgacgaggcttacgccgctctggtggacggccgcaccatcctcgacctggcc
gatgggctccagcttcaccgcgcgcgcgtcatgggcgcgaaccgggtcgaattgtcgggc
ttcaccgaggccatgcgggatcgcctgcgcgcctacggcctcttcagcgagatcatctca
tggaagctgcgcttcttcgttccggtcgacacctccggtcccgccatcctcggcaagctg
ctcgacacctatccggtcgagcggatcggcgagcgcgaggcagcgtga
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