KEGG   Aminobacter niigataensis: AMD1_0950
Entry
AMD1_0950         CDS       T09606                                 
Symbol
trbB
Name
(GenBank) putative conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
anj  Aminobacter niigataensis
Pathway
anj02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:anj00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AMD1_0950 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:anj02044]
    AMD1_0950 (trbB)
Enzymes [BR:anj01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     AMD1_0950 (trbB)
Secretion system [BR:anj02044]
 Type IV secretion system
  Trb secretion system protein
   AMD1_0950 (trbB)
SSDB
Motif
Pfam: T2SSE Zeta_toxin TrwB_AAD_bind DEAD AAA_16 AAA_30 FtsK_SpoIIIE AAA_28 ABC_ATPase MMR_HSR1 AAA_19 nSTAND3 GTP_EFTU AAA_22 CbiA AAA_7 ATPase Sigma54_activat CLP1_P Septin AAA_2 ResIII P-loop_TraG
Other DBs
NCBI-ProteinID: CAI2932232
LinkDB
Position
AMD1:932591..933574
AA seq 327 aa
MTTTSQKPEAFARGARMLRTALGSTITHLLEDPSVVEVMLNPDGRLWVDRLSEGLADTGE
RLSAADGERIVRLVAHHVGAEVHPRSPRVSAELPETGERFEGLLPPVVAAPAFAIRKPAV
AVFTLDDYVAAGIMNADQAATLRAAVVSRANILVAGGTSTGKTTLTNALLAEVAKSSDRV
VIIEDTRELQCAAPNLVAMRTKDGVATLSELVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGTGIGALRRLEQLIQEAVVTVPRALIAETIDIVAVLSGRGSARRLTE
LARVEGLDPDGDYRVIPATPASTGDPT
NT seq 984 nt   +upstreamnt  +downstreamnt
atgaccacaaccagccagaagccggaggcgttcgcgcgtggcgcgcggatgctgcgcacg
gcgctcggttcgaccatcacccatctgctcgaagacccttccgtcgtcgaggtgatgttg
aacccggacggtcgcctgtgggtggatcgactgtcggagggcctcgccgatacgggagag
cggctgtccgccgccgatggcgaacgcatcgtccgcctcgtcgcgcatcatgtcggcgcc
gaagttcacccgcgcagcccccgcgtctcggccgagctgcccgagaccggcgagcggttc
gagggcctgttgccgcccgtcgtcgccgcaccggccttcgccatccgcaagcccgccgtc
gcggtcttcacgcttgatgactatgtggcggccggcatcatgaatgccgatcaggccgcg
acgctacgcgccgcagtcgtctcgcgcgccaacattctcgtcgcgggcggcacctcgacc
ggcaagaccacgctcaccaatgcgctcctcgccgaggtcgcgaaatcatccgatcgcgtc
gtcatcattgaggacacgcgcgagctgcaatgcgccgcgcccaacctcgtcgctatgcga
accaaggatggcgtcgcgacgctttccgagctggtccgatcctccctgcgcctgcgcccc
gaccgcattcccatcggcgaagtgcgcggggcggaagcgctcgacctccttaaagcctgg
ggcaccggccatcctggcgggatcgggacgatccatgccggcaccggcatcggcgcactg
cgccgcctcgaacaactcattcaagaggccgtcgtcaccgtcccgcgcgcgctgatcgcc
gagaccatcgacatcgtggccgtcctgtcgggccgcggttctgcgcgccgactgaccgaa
ctcgcccgcgtcgaagggctcgaccccgacggggactaccgcgtcatccccgcaactccc
gccagcacaggagaccctacatga

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